Pseudoalteromonas aliena: B0W48_11940
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Entry
B0W48_11940 CDS
T04815
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
paln
Pseudoalteromonas aliena
Pathway
paln03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
B0W48_11940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paln03400
]
B0W48_11940
DNA repair and recombination proteins [BR:
paln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
B0W48_11940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AQQ00444
UniProt:
A0A1Q2GZ79
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Position
complement(2656780..2659365)
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AA seq
861 aa
AA seq
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MSFDLYAPHTIKQQTPMMQQYLKIKSEHRDILLFYRMGDFYELFFDDAKRAAQLLDISQT
HRGKAGGDPIPMAGVPYHAVENYLARLVQMGESVAICEQVGDPATSKGPVDRKVVRIVTP
GTISDEALLQERQDNLLTSVWQSKKGLYGIAYLDINSGRFNVVEVNTDEAFSSTVQRLSP
AELLYSESFENFHLIEHIKGARRRPEWEFDLDTAEHLLCDQFGTKDLVGFGVDKAHSALV
AAGCLMQYVKDTQRIALPHIRAITLEHNEHAVILDAATRKNLELTVNLSGGFENTLAQVL
DKTATPMGSRLLKRRIHTPIRNKDELNSRLNAISAILDAQLCGELHESLKEIGDVERVIA
RLALCTARPRDLTRLRSALQALAPLHTLLADANDPRIAGIIKHSPELPDLQALLEQAVIE
NPPVLIRDGGVIAPGYNSELDEWRNLSKGATDVLDQLELRERERTGISTLKIGYNRVHGF
FIEVSRANAHLVPADYIRRQTLKNNERYIIPELKEHEDKVLGSQSKALALEKQLYEELFR
FIAPHIEQLQMMAAALADLDVLNNLAERAFALNYAKPELCDNDNISIKQGRHPVVEQVMK
EPFIANPVELNSQRKMLIITGPNMGGKSTYMRQTALIVLMAHIGSYVPADSAKIGNIDRI
FTRIGASDDLASGRSTFMVEMTETATILNNATAQSLVLMDEIGRGTSTYDGLSLAYATAD
HLASKISAKTLFATHYFELTELAEQTTGLVNVHLDAIEHNDTIAFMHTVLDGAASKSFGL
QVAALAGVPKAVIAQAKQKLKLLENHQSVTAPNTEQQAFTFNNEAVQSTPSEIEEQLSAI
DPDNLSPRQAHDLLYKLKALL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgatctttatgcaccacacactataaaacaacaaacccctatgatgcagcag
tatctaaaaataaaatcagagcatcgcgatattttattgttttatcgtatgggcgatttt
tacgaactcttttttgacgacgctaaacgcgccgctcaattgctcgatatttcgcaaacc
catcgcggcaaagccggtggcgatcctatccctatggcgggcgtgccttatcatgcagta
gagaactacttagcacgcctagttcaaatgggtgaatctgttgctatttgcgagcaagtt
ggcgatccagctaccagtaaaggccccgttgatcgcaaagttgttcgtatagttacccca
ggtacaatttctgacgaagcgcttttacaagaacgacaagacaatttgcttaccagtgtt
tggcaaagtaaaaaaggcctgtacggtattgcgtacttagatattaactctggtcgcttt
aacgttgtagaggttaataccgacgaagcatttagctcaacggttcagcgcctatcacca
gcagaattgctatatagcgaaagctttgaaaattttcatttaattgagcatataaaaggg
gctcgtcgtcgcccagagtgggaattcgacttagatacggccgagcacttattatgcgat
cagtttggtactaaagatttagtaggatttggtgttgataaagcccacagcgcacttgtt
gctgccggttgtttaatgcaatacgtaaaagatacgcagcgtattgcactgccacatatt
cgtgctattacacttgagcacaacgaacacgctgttattttagatgcagcaacacgtaaa
aatttagaactgaccgttaatttatcaggtgggtttgaaaatacacttgcccaagtactt
gataaaacagcaaccccaatgggttctcgtttacttaagcgccgtattcatacacctatt
cgtaataaagatgagctaaattctcgcttaaatgcaattagcgctattttagatgcacaa
ctgtgcggcgaattacacgaatcattaaaagagattggtgatgtagagcgtgttattgcg
cgcttagcgttatgtacagcgcgtccacgcgatttaactcgcctgcgcagtgcattacaa
gcgcttgcgccgctacatactttattagctgacgctaacgaccctcgtatagcgggtatt
atcaagcactcgcctgaactccctgatttacaagcattgttagagcaagctgtaatagaa
aacccgcctgtacttattcgtgatggtggcgttattgccccaggttataacagtgaactt
gatgaatggcgcaacttaagcaaaggcgctactgatgttcttgatcaactagaactgcgt
gaacgcgaacgcacgggtattagtacacttaaaattggttataaccgcgtgcatggtttc
tttattgaagtaagccgtgccaatgcgcatttagtacccgccgactacattcgtcgccaa
acgcttaaaaataacgagcgttatataatcccagagcttaaagagcacgaagataaagtg
cttggcagccaatcaaaagccttagcgcttgaaaaacaactatacgaagagctatttagg
tttattgctccacatattgaacagttgcaaatgatggccgccgcactggctgatttagac
gtattaaataatttagctgagcgtgcatttgcgctaaattacgcaaaaccagaactgtgc
gataacgacaacattagcatcaagcaaggtcgccaccctgttgttgaacaagtaatgaaa
gaaccgtttattgctaaccctgttgaattaaacagccaacgtaaaatgttgattattacc
ggcccaaatatgggcggtaaatcaacctatatgcgccaaactgcacttattgtactaatg
gctcacattggcagttatgtacccgcagacagcgctaaaattggcaatatcgaccgcata
tttacacgtattggcgcaagtgacgatttagcctctgggcgctcaaccttcatggtagaa
atgaccgaaaccgcgaccattttgaataatgccacggcacagtctttggtattaatggat
gagattggtcgcgggacaagtacctacgatgggctttcgcttgcgtatgcaacagccgat
catctagcatcaaaaatatctgcaaaaacattatttgcaacacactactttgaactaaca
gaacttgctgaacaaaccacgggccttgtaaacgtgcaccttgatgccatagagcataac
gatacaatcgcctttatgcacaccgtacttgatggcgcagcaagtaaaagttttggctta
caagtagcagctctcgcgggggtgccaaaagcagtcattgcgcaagcaaaacaaaaactt
aaattacttgaaaaccatcaaagcgtaacggcgccaaatacagagcaacaagcatttact
tttaacaacgaggccgtacaaagtacgccttctgaaatagaagagcagttaagtgctatc
gaccctgataatttatcgccgcgccaagcacacgatttattatataaactaaaagcattg
ctttaa
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