Pseudoalteromonas aliena: B0W48_13290
Help
Entry
B0W48_13290 CDS
T04815
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
paln
Pseudoalteromonas aliena
Brite
KEGG Orthology (KO) [BR:
paln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paln03016
]
B0W48_13290
Enzymes [BR:
paln01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
B0W48_13290
Transfer RNA biogenesis [BR:
paln03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B0W48_13290
Prokaryotic type
B0W48_13290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Mucin2_WxxW
SapB_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AQQ02097
UniProt:
A0A1Q2H411
LinkDB
All DBs
Position
2967602..2968396
Genome browser
AA seq
264 aa
AA seq
DB search
MRVALGVEYNGVRYSGWQRQSHVNSVQQEVEKALSRICNHPVEVICAGRTDAGVHGTGQV
IHFDTEADRDMVAFTLGMNTLMPKDIAIRFAQPVAEDFHARFSATARRYRYIIYNSPLRG
AVLNEGVTHFHHHLDEVKMQQACQYLVGKHDFTSFRAIHCQANTPTRTIHHLSVQRIGNY
VVIDIKANAFLHHMVRNITGSLMDIGLHKQQPIWLKELLDCKERAKASATAKAAGLYLVD
VDYPEQFKVPKMPLGPLFLPDIGI
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtagcacttggggttgaatacaatggcgtacgctacagtggttggcaacgccaa
tcacatgtaaatagtgtacaacaagaagtagaaaaagcgttgtcgcgtatttgtaatcac
cctgttgaagtaatatgtgcggggcgcaccgatgcaggcgtacatggtacaggccaagta
atacattttgacactgaggccgaccgcgacatggtggcatttactttaggcatgaatacg
ttaatgcctaaagatattgcaattcgttttgcgcagcctgtggcggaagattttcatgct
cgctttagcgccacggctcgtcgttatcgttatattatttacaactcgcctctgcgtgga
gctgtattaaatgagggcgttacacactttcatcatcacttagatgaagtaaaaatgcag
caggcatgccagtatctagttggtaagcacgattttacttcttttagagcgattcattgc
caagcaaatacgcctactcgaacaattcatcacttatcggtgcaacgtattggaaactat
gttgttattgatatcaaagcgaatgcatttttacatcatatggtccgtaatataacgggt
agtcttatggacattggtttacataaacagcaacctatttggttaaaagagttacttgat
tgtaaagagcgtgcaaaggccagcgcgacagctaaagccgctggtttatatttggttgac
gttgattaccctgagcagtttaaagttcctaagatgccattaggaccattgtttttacca
gatatcggtatttaa
DBGET
integrated database retrieval system
