Pseudoalteromonas aliena: B0W48_13605
Help
Entry
B0W48_13605 CDS
T04815
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
paln
Pseudoalteromonas aliena
Pathway
paln03030
DNA replication
paln03430
Mismatch repair
paln03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B0W48_13605
03430 Mismatch repair
B0W48_13605
03440 Homologous recombination
B0W48_13605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paln03032
]
B0W48_13605
03400 DNA repair and recombination proteins [BR:
paln03400
]
B0W48_13605
Enzymes [BR:
paln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B0W48_13605
DNA replication proteins [BR:
paln03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B0W48_13605
DNA repair and recombination proteins [BR:
paln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B0W48_13605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AQQ00754
UniProt:
A0A1Q2H059
LinkDB
All DBs
Position
3031145..3034636
Genome browser
AA seq
1163 aa
AA seq
DB search
MAAPDFVHLRVHSDFSMVDGLAKTKPIVAKAQELQMPAIAITDQMNFCGLVRFYGATHNA
GIKPIVGADFWVRSPEFPDEPSRLTILAKDNDGYKNITLLISKAYQRGHVFHRPVIDREW
LVEHKTGLIILSGAKDGDLGKALLKNNPSVIESVVSFYKQHFSDNYYLELVRTNRPLEED
YLHMAVELATKEQLPVVATNEVVFLKPENFEAHEIRVAIFDGYTLDDKRRPKRFSEEQYL
KTPEQMAELFSDIPEALQNTVEIAKRCNVTVQLGTYFLPDYPTGSLKIDEFLVKVSEDGL
EERLQFLFPDEEERKVKRVEYDERLDIELGVINQMGFPGYFLIVMEFIQWSKDNNIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVSA
LYGRNAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKMIPGDPGMTLAKAFDIEPR
LQEAYDGDNEVKDLIDMCRILEGCTRNAGKHAGGVVISPTTITDFAALYCDDEGKFPVTQ
FDKNDVETAGLVKFDFLGLRTLTILQWAVDMTNVRMERQGKDLVDINTIPLDDKKSIELL
LRAETTAVFQLESRGMKDLVRRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKLGREE
ISYPDAQYQHESLKPILDPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSTFEDGARNNGIDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWMKTHHPA
EFMAAVMSADMDNTDKIVILVDECENMKLTLLPPDVNAGEFKFTVNLQGEIVYGIGAIKG
VGEAPVEAILEARAKGGPFKDLFDFCARVDLKRLNKRVTEKLIYSGALDNLGPEKTQPGR
ATLLASLKSAMRAADQHNKAELLGQSDLFGLLATEPDEVEQAFIKATGLTDNEWLDGEKE
TLGLYLTGHPINQYRRELKHYTSGKIVDLQPTNRDVFATAAGLVIASRVLINKKGNRWAL
VTLDDKSARIDVRLYSDEFEKYQDMLQVNNILVISGQVSFDNFSGGITMTAREINTIAQA
REKRIKAIKMTLNMVQVEAGFFDKLQKVLEPYKMGTCPIKVYYQRPDALAQLTLGIEWCV
TPSDDLIHKLSLMAAQDVELEFN
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcctgattttgttcatttaagggttcactctgacttttcgatggttgacggc
cttgctaaaacaaagccaatagttgctaaagcgcaagagctgcaaatgcccgctattgcg
attaccgaccaaatgaacttttgtggtttagtgcgcttttatggcgcaacgcataacgcc
ggtattaaacctattgtgggtgctgatttttgggttcgtagcccagaatttccagacgag
ccaagccgcttaaccatattagccaaagacaacgacggctataaaaacattaccttatta
atatctaaagcgtatcaacgtgggcatgtgtttcatcgccccgttattgaccgagaatgg
ctggtggagcataaaacgggcttaattattctctcgggcgctaaagatggtgacttaggt
aaagcgttattaaaaaataatccaagtgttattgaatcggtagttagcttttataagcag
cattttagcgataactactaccttgagcttgttcgcaccaatcgccctttagaagaagac
tacttgcacatggcggtagagcttgctaccaaagagcagttacctgttgtagcgaccaac
gaagtagtgtttttaaagcctgaaaactttgaagcgcacgaaattcgcgttgctattttt
gacggctacacgcttgatgataaacgccgccctaaacgattctctgaagaacaataccta
aaaacaccagagcaaatggcagagctgtttagcgacattccagaagccctacaaaacaca
gtagaaatagctaaacgttgtaatgtaacggttcagctagggacttactttttacctgat
tacccaacgggctcacttaagattgatgagtttttagttaaagtatcagaagacggtctt
gaagagcgattacagtttttattccccgatgaagaagagcgaaaagtaaaacgtgttgaa
tacgatgagcgacttgatatagagcttggcgtaattaaccaaatgggattcccaggttac
ttcttaatcgtaatggagtttattcagtggagtaaagataacaatattccagttggacct
ggtcgtggttcaggtgcgggttcgttagttgcgtacgcacttaaaattaccgatttggat
ccgcttgagttcgatttactttttgagcgatttttgaatcctgaacgtgtatcaatgccc
gatttcgacgtcgatttctgtatggatagacgagacgaagtaattgatcacgtgtctgct
ttgtatgggcgtaacgccgtatcgcaaattattacctttggtactatggctgcaaaagcg
gtaatacgcgatgtagggcgagtgcttgggcatccttatggattcgttgatcgtatctca
aaaatgattccaggcgatcccgggatgacacttgctaaagcgtttgatatagagccacgc
ttgcaagaagcctacgatggcgacaatgaagtaaaagatttaatcgacatgtgtcgcatc
cttgaagggtgtacacgtaacgccggtaaacatgcgggtggcgtagtgatatcgccaacc
actattaccgactttgccgcgctttattgcgatgacgaaggtaagtttccggtcacgcag
tttgataaaaacgacgtagaaaccgcaggcttagttaagttcgatttcttgggcttgcgt
acactgactatattgcagtgggcggtcgatatgaccaatgtgcgcatggagcgccaaggt
aaagatctagttgatataaataccattccactggatgataaaaaaagtatcgagttacta
cttcgcgccgaaacgaccgctgtattccagctagaatcgcgcggtatgaaagacttagta
cgccgtctaaagcccgattgctttgaagatatgattgcgcttgtggccttgttccgccca
ggtccgctgcaatcaggcatggtagataactttatcgaccgaaagttgggccgagaagaa
atctcatacccagatgcgcaatatcaacacgaaagcttaaaaccaatacttgatccaacg
tacggtattatcttgtatcaagaacaagtaatgcaaattgcgcaagtattagcaggttac
acgctcggtggtgccgatatgcttcgccgtgcaatgggtaagaaaaaacccgaggaaatg
gcaaaacagcgttcaacgtttgaagatggcgcacgaaataacggcattgacggcgagctc
gcgataaaaatcttcgacttggtggaaaagttcgcaggttacggctttaataaatctcac
tcggcggcgtacgcactggtatcgtatcaaacgttgtggatgaaaacccatcatcctgca
gagtttatggctgcggtaatgtcggccgatatggataacaccgacaaaatagttattttg
gtggatgaatgtgaaaacatgaagctcaccttattgccacccgacgtaaacgcaggcgaa
tttaaatttacagtaaatctgcaaggtgaaattgtttacggcattggcgcgataaaaggc
gtgggtgaagcaccggttgaagctattttagaagcgcgtgcaaaagggggcccatttaag
gatttatttgatttttgtgcccgcgttgacttaaaacgcttaaataaacgtgttactgaa
aaattaatttactcaggcgcactggataatttagggcctgaaaaaacccaacctgggcgt
gctacgttattagctagtttaaaaagtgcgatgcgtgcggccgaccaacacaacaaagct
gagttattagggcaaagtgatttgtttggtttattagctaccgaaccagatgaagttgaa
caagcctttattaaagccacaggcctcaccgataacgaatggttagatggcgaaaaagaa
accctaggcctttatttaacagggcatccgataaatcagtaccgccgtgaacttaagcat
tacaccagcggaaaaatagttgatttacagccaactaatcgcgacgtgttcgcaacggcc
gctggtttagtgattgcttctagggtattaattaataaaaaaggaaatcgctgggcctta
gtaactttagatgacaagagtgcacgcattgatgtacgcttgtattcagacgagtttgaa
aagtaccaagatatgctgcaagttaataatatcttggtaatatctggacaggtcagcttt
gataacttctctggtggtattacaatgaccgctagagaaataaacaccatagctcaagcg
cgtgaaaaacgtattaaagcgattaaaatgacgctgaacatggtgcaagtcgaggctggt
ttcttcgataaattacaaaaagtactcgaaccatacaaaatgggaacgtgtccgatcaaa
gtttattaccaacgtccagatgcgttggcgcaattaactcttggtatcgaatggtgtgtt
acgccaagtgacgacttaattcataagttatcgctaatggcggcgcaagatgtagaacta
gaatttaactaa
DBGET
integrated database retrieval system
