Pseudoalteromonas aliena: B0W48_14290
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Entry
B0W48_14290 CDS
T04815
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
paln
Pseudoalteromonas aliena
Brite
KEGG Orthology (KO) [BR:
paln00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
paln01011
]
B0W48_14290
Enzymes [BR:
paln01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
B0W48_14290
Peptidoglycan biosynthesis and degradation proteins [BR:
paln01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
B0W48_14290
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM_OapA
LysM_RLK
LysM3_NFP
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-ProteinID:
AQQ00862
UniProt:
A0A1Q2H0G8
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Position
complement(3161146..3162729)
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AA seq
527 aa
AA seq
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MNKPPLLVVLAFALSGCQTVTTLESDSQIASQANQQLGGASPNDINNALMVNAQYQQIDS
EEQEAPVFDDVWERIRYQLSIDIPQNRPVVAERNYYARHQAYLDRISKRAEPYLHFIVEE
VEKREMPIEIALLPIVESAFDPFGYSNRSASGIWQFMPATGERFDLKQNWWYDGRRDIVQ
STRAALDYLSYLHKTLEGDWLNAIAAYNSGEGRLMRAIKKNRKKHLPTDFWSLDLPRETT
AYVPKLLALADLLKRSDDFNVTWQPVINAQVVEVVNIGSQIDLALAADMADMTLTELYRL
NPGFNRWATDPNGPHSLLLPVDKAEQFSQKLARTDIKDRLRWQQYTVARGDSLSVIAKKF
TTSLSAIRSLNKLKSNTIKVGQQLLVPLTDGAINSEHLPKQMRLAANKSTRTKLTHKVKS
GDTLWDISREYDVTMDELAKWNKLKKNSVLRLNQNLTVYKSINKPQSAIASTNRTITYKV
RRGDSLARIASKFNLAVNDIIKWNNLAGQKYLQPGQKLKLKVDVRSS
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacctcccctattagtagtcttggcgttcgcgctaagtggttgtcaaacagtc
acaactttagagtcagactctcaaattgcctcgcaagcaaatcagcagctaggcggcgca
agtcccaacgatattaacaatgcattgatggtaaacgcacaatatcagcaaattgacagt
gaagaacaagaagcccccgtgtttgatgatgtatgggagcgcatccgctatcaactttct
atcgacataccacaaaaccgccccgttgtggcagagcgtaattattacgcaaggcaccaa
gcttacttagatcgtatttccaaacgcgcggagccctatttacattttattgttgaagag
gtcgaaaagcgtgaaatgccaatcgaaattgcactattgccaattgtagaaagtgcattt
gatccgtttggttattctaatcgcagtgcatctggcatttggcagtttatgcctgcaacc
ggtgagcgattcgatttaaaacaaaactggtggtacgacggtcgccgtgacattgtgcaa
tcgactcgtgctgcacttgattacttatcctatttacataaaacactcgaaggcgattgg
ttaaatgcaattgctgcgtataattcgggtgaagggcgtttaatgcgggcgattaaaaag
aatcgtaaaaagcatttacctaccgacttttggtctcttgatttaccaagagaaacaaca
gcctatgtgcctaaactattagcccttgctgatttattaaaacgctcagatgactttaac
gtcacatggcagcctgttattaatgcacaagtagttgaagtggttaatatcggctctcaa
atcgacttagcactggctgccgatatggctgatatgacgcttactgagctatacaggcta
aaccctggctttaatcgctgggcaacggatccaaatggtcctcattctttattattgccc
gtagataaagcagagcaatttagccaaaaactggcacgaacagacattaaagatcgttta
cgctggcaacaatatacagtagcacgcggtgatagcttatcggtaattgctaaaaagttt
acaacaagtttgagcgctattcgttcgcttaataaactcaagtcaaatacgattaaagta
ggccaacaattattagttccgctgactgatggcgcaataaatagcgagcatttaccaaag
caaatgcgcttagcagcaaataaaagcacacgaactaaacttacccataaagtaaaaagc
ggcgatacattgtgggatattagccgagaatacgatgtgactatggatgaattagctaaa
tggaataagctgaagaaaaactctgtgctgcgtttaaatcaaaatcttactgtctataaa
tcaataaacaagcctcaaagtgctattgccagcaccaaccgtacgattacgtataaagta
cgccgaggcgattcacttgcacgtattgcgtctaaatttaacttagctgttaacgatatc
attaagtggaataatttagctggtcaaaaatacttacaacctggccaaaagctaaaactt
aaagtagatgtcagaagtagttaa
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