Pseudoalteromonas aliena: B0W48_18060
Help
Entry
B0W48_18060 CDS
T04815
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
paln
Pseudoalteromonas aliena
Pathway
paln03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
B0W48_18060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paln03400
]
B0W48_18060
Enzymes [BR:
paln01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
B0W48_18060
DNA repair and recombination proteins [BR:
paln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
B0W48_18060
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B0W48_18060
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B0W48_18060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AQQ01512
UniProt:
A0A1Q2H2D1
LinkDB
All DBs
Position
4047141..4048586
Genome browser
AA seq
481 aa
AA seq
DB search
MAYQEQNQATIYWHDYETWGASPQKDKPSQFAGIRTDLDLNIIGEPLIEYCKPQADYLPH
PEACLITGITPQVAMKKGLVEAEFIAKIHAEFSVPNTCVAGYNSIRFDDEVSRYSFYRNF
YDPYEREYKNNNSRWDIIDLVRACYALRPEGIEWPLKEDGSPSFKLEHLTVANGIEHAAA
HDALSDVTATIALAKLIKEKQPKLYNFFFGLRNKKALAELVDVFNMTPLVHTSSRIPATQ
GCTSWVAPMSFHPVNKNAVICFDLTQSPQVLIDLNVEELRKRLYTKRVDLAEDDLPVGLK
LVHLNKCPILAPAKTLLPENAARLGIDREQCLANLATLKANTELRDKVTEVFNEKGDYSA
TTNVDYLLYDGFTSHADKAKFAIIRDAKPDELAGLNLDFEDKKFNTLLFRYRARNWPETL
NQQELDQWRQYCQNKLMHGEEQPSINAQDFMITLENLAHEHDDSEKNLTILKALYNYAQS
M
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcatatcaagagcaaaatcaagcaacaatctattggcacgactacgagacttggggg
gcgagcccacaaaaagataagccgagccaatttgcgggtattcgtaccgatcttgattta
aatattattggcgagccgcttattgaatattgtaagccgcaagcggattacttgcctcac
cctgaggcgtgtttaattacgggtattacgccacaagtggcgatgaaaaaaggcttggtt
gaggctgagtttatagcaaaaattcatgccgaatttagtgtaccaaacacctgtgttgcc
ggttacaacagtattcggtttgatgacgaagtaagccgttatagcttttaccgtaatttt
tacgacccatacgagcgcgaatacaaaaataacaatagccgctgggatattattgattta
gtacgtgcttgttacgcgctgcgccctgaagggattgaatggccgttaaaagaagacggc
agcccaagctttaagctagagcatttaaccgtagccaatggtattgaacacgctgctgcg
cacgatgcgctcagcgatgtaaccgccactattgcactggctaaattaataaaagaaaaa
caaccaaagctgtataacttcttttttgggctgcgtaataaaaaagcgctcgctgaattg
gttgatgtatttaacatgaccccgctggtgcatacctcgtcgcgcatacctgcaacacaa
ggctgtacaagctgggttgcaccaatgagctttcatccggtaaataaaaacgcggttatt
tgttttgatttaactcaaagcccgcaagtactcattgatttaaacgtagaagaattacgc
aaacgcttgtacaccaaacgtgtagatttagccgaggacgatttacctgttggcttaaaa
ctagtgcatttaaacaagtgccctattttagccccagctaaaacattattgcctgaaaac
gccgcccgccttgggattgaccgcgagcagtgcttagctaacttagctactttaaaagcc
aataccgagcttcgcgataaagtaaccgaagtgtttaacgaaaaaggcgattacagcgca
accactaacgttgattacttactttacgatggttttacaagccatgccgacaaggctaag
tttgcgattattcgtgatgcaaaaccagatgaattagctggattgaatttagactttgaa
gataaaaagtttaatacgttattgtttagataccgcgcccgaaactggcctgaaacgcta
aaccagcaagagcttgaccaatggcgccagtattgccaaaacaagctgatgcacggggaa
gaacaaccgtcgattaacgcgcaagattttatgataacgcttgaaaacctagcgcatgaa
catgacgacagcgaaaaaaatctgacaattttaaaggcgctatataactacgcacaaagc
atgtga
DBGET
integrated database retrieval system
