Pseudoalteromonas aliena: B0W48_19505
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Entry
B0W48_19505 CDS
T04815
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
paln
Pseudoalteromonas aliena
Brite
KEGG Orthology (KO) [BR:
paln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paln03016
]
B0W48_19505
Enzymes [BR:
paln01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
B0W48_19505
Transfer RNA biogenesis [BR:
paln03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B0W48_19505
Prokaryotic type
B0W48_19505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AQQ01768
UniProt:
A0A1Q2H331
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All DBs
Position
complement(4378489..4379448)
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AA seq
319 aa
AA seq
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MAKRSKGRAVDGILLLNKPQGISSNKALQQAKGAYFAQKAGHTGALDPLATGMLPICFGE
ATKFTQFLLDTDKTYVVRAKLGERTTTSDSDGEIVSTKDVNVTREQLTKEIAAFVGESDQ
YPSMYSALKYQGRPLYKYAREGIEVPRKCRKINVFSLSFDEFDEENNVLQMTAHVSKGTY
IRTIVDDLGENLGCGAHVIMLHRTAVGQYPADKMVSLDDVEALLAKAKSEEIAPSTYIDP
LLLPIDTALVDLPVVEITKEQGSVFSHGQAVELPITLPDGSIKVLADGVFIGTGEANANG
HLKVKRGLASQQDDYVKPE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcgcagtaaaggccgtgcagtagacggtattttgttgttaaacaaaccgcaa
ggcatttcatcaaataaagcactgcaacaggcaaagggtgcttattttgcacaaaaagcc
ggccatacaggtgcacttgatccgcttgcaacaggcatgctgccgatttgttttggtgag
gcgactaaatttacgcagttcttacttgatactgacaaaacctatgttgttcgcgctaag
ttaggtgaacgtacaacaacatcagactctgatggtgaaattgtcagtaccaaagacgtt
aatgtaacgcgtgaacagctaacaaaagaaattgctgcgtttgttggcgagtctgatcag
tatccatctatgtattcggcacttaaatatcaaggcagaccgttatataagtatgcacgt
gaaggtattgaagtacctcgtaaatgcagaaagataaatgtgtttagtttatcatttgac
gagtttgatgaagaaaacaacgtattacaaatgacggcccatgtatcaaaagggacttat
atccgtactattgtagatgacttaggtgaaaacctagggtgtggcgcacatgtcataatg
cttcacagaactgcggttggtcagtacccagcagataaaatggtttcgctcgatgacgtt
gaagcgttattagcaaaagcaaaaagtgaagaaattgcaccttctacttatatcgatcca
ttgctgctaccaattgataccgctttagttgatttacctgtggttgaaataacgaaagag
cagggctcggtgtttagtcacgggcaagcagtcgaattaccaataacgttacctgatggt
tcaattaaggtattggctgatggtgttttcatcggtacaggcgaagcgaatgctaacggt
cacttaaaagtgaagcgtggacttgccagtcagcaagatgattacgtaaaacctgaatag
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