Pseudoalteromonas aliena: B0W48_19545
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Entry
B0W48_19545 CDS
T04815
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
paln
Pseudoalteromonas aliena
Brite
KEGG Orthology (KO) [BR:
paln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paln03400
]
B0W48_19545
Enzymes [BR:
paln01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
B0W48_19545
DNA repair and recombination proteins [BR:
paln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
B0W48_19545
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DPRP
DUF2380
MMR_HSR1_Xtn
DUF5856
Motif
Other DBs
NCBI-ProteinID:
AQQ01775
UniProt:
A0A1Q2H341
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All DBs
Position
4387549..4389105
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AA seq
518 aa
AA seq
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MTHYKTLRLILGDQLNPSHSWFKHKDNDTLYLVAELKQETDYVKHHIQKICAFFSAMENF
AHALSCAEFNVLHLTLDETQNDKNLPDLLNRIAKKYHCSAIQYQYPDEFRLKEQLSLFKQ
ASTYNVTAVDSEHFLLPFSQIKERFSKNKHVTMEHFYRAMRKQFDVLMEQGKPEGGKWNF
DSNNRNKFSKNDLVDIPLPKVFNNDVSTIIDRLDKHQVSYFGEIKNQRLQWPTTRKQAIS
CLEYFCENLLINFGQFQDAMTNQSEHNTSLYHSRLSFAINAKLLHPLYVINRVINEYRQR
PNEISISQVEGFVRQILGWREYVRGVYWINMPDYARKNQLQAKNKLPEYFWHGSTKMNCL
SHSLSQSLTTAYAHHIQRLMVIGNFCMLTGINPDDVDNWYLGVYIDAIEWVEMPNTRGMS
QFADDGIIATKPYAASGNYINKMSDYCKSCQYDVKQKVGEKACPLNSLYWNFMHTHRSKL
EKNPRIGMVYKNWDRQTEEQKAALLKQAAAYLVDLESL
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgactcattataaaacattaagacttattttaggtgatcaacttaacccgtctcactcc
tggtttaaacataaagacaatgacactctttatcttgtcgcagagcttaagcaagaaact
gattatgttaagcatcatattcaaaagatatgtgcattttttagtgctatggaaaacttt
gcccatgcgctaagttgcgcagagtttaatgtattacacttaaccctagatgaaacccaa
aatgataaaaatttacccgatttacttaatcgcatagcgaaaaaatatcactgctcagcc
atacaatatcaatatcctgatgagttcagactcaaagagcaactttcattatttaaacaa
gcaagcacatataatgtaaccgcagtcgatagcgagcattttttacttcccttttcgcaa
ataaaagagcgtttttcaaaaaacaaacatgtaacgatggagcatttttatcgcgctatg
cgtaagcaatttgacgtacttatggagcaaggaaaacctgaaggcggtaaatggaatttt
gatagtaataatcgtaacaagttttctaaaaacgacttagtggatatacctttacccaag
gtttttaataatgatgtaagtacaattattgatcgcttagataaacatcaagtgagctac
tttggtgaaataaaaaatcaacgtttacaatggccaaccactagaaaacaagctattagc
tgccttgagtacttttgtgaaaatttacttattaattttggtcagttccaagatgcaatg
acaaatcaaagtgagcacaacactagcctttatcatagccgattgtcgtttgccataaac
gcaaaattgcttcatccactttatgtcattaatcgagtcataaacgaatataggcaaaga
cctaatgaaatatcaatctcacaagtagaaggcttcgttagacaaattttagggtggcga
gagtatgtccggggtgtttattggatcaatatgcccgactacgcacgtaaaaaccaatta
caggcgaaaaataaattacctgaatacttttggcatggctctacaaaaatgaactgtttg
agccactctctttcgcaaagtttaacaacggcttatgcccatcatattcagcgcttaatg
gttattggaaacttttgtatgctcacgggaattaatcctgatgacgtagataactggtat
ttaggtgtttatatagatgctattgaatgggtagaaatgcctaatacacgtggcatgagc
caatttgccgatgatggtattattgcgacaaaaccctacgcagcgagtggaaactacatt
aataaaatgagcgattactgcaagagttgccaatacgatgttaaacaaaaagtgggagaa
aaagcatgcccccttaatagcctatactggaactttatgcacacccaccgcagtaaatta
gagaaaaacccgcgtataggcatggtttataaaaactgggaccgacaaaccgaagagcaa
aaagcagcgctattaaaacaagctgctgcgtatttagttgatttagaaagtctgtga
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