Pseudoalteromonas aliena: B0W48_20105
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Entry
B0W48_20105 CDS
T04815
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
paln
Pseudoalteromonas aliena
Brite
KEGG Orthology (KO) [BR:
paln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paln03400
]
B0W48_20105
Enzymes [BR:
paln01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
B0W48_20105
DNA repair and recombination proteins [BR:
paln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
B0W48_20105
Prokaryotic type
B0W48_20105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AQQ01877
UniProt:
A0A1Q2H3D2
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All DBs
Position
4509133..4510662
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AA seq
509 aa
AA seq
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MRIKINIVWFKRDLRLRDHPPLKNAFSNGLPTLLLYNFEPLLLEDAHYNERHWRFVYQSI
VELNKQLARFNTCVYIFNLNMSDLLESLKTQFEIINIFSHQEIGLNNTFKRDKVVKAWCQ
HNHINWLESQTGAVIRGKKNRDNWNEHWQKTMQSPIAVPNWKNIQTIALNNYQAPDLPNT
YTQDDDNFQRGGPLHAQEIMHSFFAERGKGYQKGISSPSLSQTHCSRLSPYLAWGNISLR
QVYQMAIEQYHSKHPNKKGWKRPLAAFVSRLHWHCHFMQKFESECTMEFLALNPGYHVFP
YRDDKNVKSDVQRWALGQTGIPIIDACMRCLKATGYINFRMRAMLVSFVTHHLNISWQQA
SFPLANYFLDFEPGIHYPQIQMQASVTGINTIRHYNPIKQSEDQDPTGTFIKKWCPELEK
LPIEYLHEPWQQTPMEALFNDFKLGEDYPEPMLDLTTASKQARERLWQYRERADVKRAIG
VILKKHVTQTKKVTRVKRKIPSKNNKEDS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgcgtataaaaataaacatagtctggtttaaacgcgatttacgcctacgcgaccacccg
cctttaaaaaatgcttttagtaacggtctacccacgctattactttataactttgaacct
ctgctacttgaagatgctcattacaacgagcgccattggcgctttgtataccaatcaatc
gttgaattaaataaacagttagctcgttttaacacctgcgtttatatatttaatttaaac
atgagcgacttacttgaatcattaaaaacgcaatttgaaataattaatatttttagtcat
caagaaataggcttaaacaacacgtttaagcgagataaagttgttaaagcgtggtgccaa
cataatcacattaattggctggagtcgcaaacaggtgctgttatacgcggtaaaaaaaat
cgcgataattggaatgagcattggcaaaaaacaatgcaatcacctattgccgtacccaac
tggaaaaacattcagactattgcgctaaataactatcaagcacctgatttacccaatact
tacacacaagacgatgataattttcaacgaggcggcccgctacatgcccaagagatcatg
catagtttttttgctgaacgcggtaaaggttatcaaaagggtatatctagcccaagttta
agccaaactcattgctctcggctttcgccttatttagcgtggggtaatattagcctcagg
caagtgtatcaaatggctattgagcaatatcattcaaagcatccaaataaaaaaggctgg
aaacgcccgcttgcagcgtttgtgtctcgcctgcattggcattgccactttatgcaaaaa
tttgaaagcgaatgcacaatggaatttttggcccttaatcctggttatcatgtatttcct
tatcgtgatgacaaaaacgtgaaaagtgatgttcaacgctgggcgctgggccaaacaggc
attccaattattgacgcttgcatgcgctgcttaaaggcgactgggtatataaactttaga
atgcgcgccatgcttgtgagctttgtaacgcatcatttaaatataagctggcagcaagca
agctttcctctcgctaattactttttagattttgagccaggaattcactacccgcaaatt
caaatgcaagcatcggtaacagggattaataccattcggcattacaacccaattaaacaa
tcagaagatcaagatccaacaggtacttttattaaaaaatggtgccccgagcttgaaaag
ctccctattgaatatttgcacgagccttggcaacaaaccccgatggaagcgctatttaac
gactttaagctaggagaagattaccccgagccaatgcttgatttaaccacggcttcaaag
caagcgcgcgaacgcttatggcaataccgcgagcgagcagatgttaaacgcgccatagga
gtcatccttaaaaaacacgtaacccaaaccaaaaaagttactcgcgtaaaacgcaaaata
cctagtaaaaataacaaagaggactcataa
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