Paenibacillus algicola: E6C60_0006
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Entry
E6C60_0006 CDS
T07807
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
palo
Paenibacillus algicola
Brite
KEGG Orthology (KO) [BR:
palo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palo03032
]
E6C60_0006
03400 DNA repair and recombination proteins [BR:
palo03400
]
E6C60_0006
Enzymes [BR:
palo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
E6C60_0006
DNA replication proteins [BR:
palo03032
]
Prokaryotic type
DNA Topoisomerases
E6C60_0006
DNA repair and recombination proteins [BR:
palo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E6C60_0006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QCT00735
UniProt:
A0A4P8XEK9
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All DBs
Position
4422..6326
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AA seq
634 aa
AA seq
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MNQPAYDENQIQVLEGLEAVRKRPGMYIGSTSEKGLHHLVWEVVDNSIDEAMAGICDEIE
VIVHKDNSITVIDNGRGIPVGENAKLKKSTLEVVMTVLHAGGKFGGGGYKVSGGLHGVGV
SVVNALSSKVVVQVKRDGHVYQQEYHRGVPQYDIQVIGDSDEHGTTVTFLPDPEIFTETT
EYNYQTLLTRIRELAFLNKGIALSLMDERTGASNRFKYDGGIIEYVKFLNENKQALHEDP
IYVEGSRDNIQVEVSLQYNDSYTENIYSFANNINTHEGGTHESGFKSALTRIINDYARKA
GLIKDNSGNLTGDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEARGIVESLFSEKLQEF
LQENPSVSRRILDKALQASRAREAARKAREMTRRKSALEVSALPGKLADCSSKDASISEL
YIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDRILSNTEIRAIITALGTGIGD
DFDLDKARYHKIIIMTDADVDGAHIRTLLLTFFYRYMRKIVEAGFIYIAQPPLFKVERNK
VVRYAGTERERDEIIAGFGENAKFNVQRYKGLGEMNAAQLWETTMDPESRTMLQVTIEDA
IIADSIFDTLMGDNVEPRRDFIQEHAKSVRNLDI
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaccggcttatgatgagaatcagattcaggtgctggaaggcttggaggccgtc
cgcaaacgtccggggatgtatatcggatccaccagcgagaaggggctgcaccacctggtc
tgggaagtggtggataacagcattgatgaagcgatggccggcatctgtgatgagatcgag
gttatcgtccataaggataacagtattacggtcattgataacggtcgcggtattccggtc
ggtgagaatgccaagctgaagaaatccacgctggaggtcgtcatgacagtgctccatgcc
gggggtaaattcggcggcggcggctacaaggtgtccggcggtctgcatggcgtcggcgtc
tcggtcgtgaacgccttgtcgagcaaggtggtcgttcaggttaaacgcgatggccacgtg
tatcagcaggaataccatcggggtgttccgcaatatgatattcaggtgatcggggatagt
gatgagcatggcactaccgtgaccttcctgccggatcccgagatttttacggaaacgaca
gaatacaattaccagacactgctgactcgcatccgcgagctggccttcctgaacaagggc
attgccctttccttgatggatgaacgcacgggagccagcaaccggttcaaatatgacggc
ggcatcattgagtacgtgaaatttctgaatgagaacaagcaggcgctgcatgaggatccg
atttatgtagagggctcccgcgacaatattcaggttgaggtgtccctgcagtacaatgac
agctataccgagaatatttattccttcgccaacaacatcaacacgcatgagggcggaacc
catgaatccggcttcaagagcgccctcacccggattattaatgattatgcccgcaaagcc
ggcctgatcaaggacaacagcggtaatctgaccggggacgatgtgcgtgaaggcttaacc
gcgattatctcggtcaagattccggagccgcagtttgaaggccagacgaagacgaagctc
ggcaacagtgaggcacgtggcatcgtggaatccctcttctcagagaagctgcaggaattc
ctgcaggagaacccgtcggtatcccggcggattctggataaagcgctgcaggcatctcgt
gcccgtgaagcagcccgtaaagcgcgggagatgacgcgccgtaagagtgccctggaggtc
agtgcactgccgggcaagctggccgactgctcctccaaggatgcttcgatcagtgagctg
tacatcgtcgaaggcgactccgccggcggatctgccaagcagggcagagaccgccatttc
caggctattttgccgctgcggggcaagattctaaacgtcgaaaaggcgaggctggaccgt
atcttgtccaataccgagatccgggcgattattacggcactcggtaccggcattggtgat
gatttcgacctggataaagctcgttaccacaagatcattatcatgacggatgctgacgta
gacggagctcatattcgtaccctgctgctgacattcttttaccggtacatgcgcaagatt
gtcgaagcgggctttatctatattgcgcagccgccgctgtttaaggtggagcgtaacaag
gtggtccgttatgcgggcacggagcgggagcgggatgaaatcatcgccggattcggagag
aacgccaagtttaacgttcagcgctataaaggccttggtgagatgaatgcagcgcagctg
tgggagacgacgatggaccctgagagccgcacaatgcttcaggttacgattgaggatgct
attattgccgacagcatttttgataccctcatgggggataatgttgagccgcggcgggac
ttcattcaggagcatgccaagtctgtgcgtaacctggatatctaa
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