Paenibacillus algicola: E6C60_0431
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Entry
E6C60_0431 CDS
T07807
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
palo
Paenibacillus algicola
Pathway
palo03420
Nucleotide excision repair
palo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
palo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E6C60_0431
03430 Mismatch repair
E6C60_0431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palo03400
]
E6C60_0431
Enzymes [BR:
palo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E6C60_0431
DNA repair and recombination proteins [BR:
palo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E6C60_0431
MMR (mismatch excision repair)
Other MMR factors
E6C60_0431
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
YdjO
Viral_helicase1
AAA_30
Zn_Ribbon_1
Mb0984_helical
Motif
Other DBs
NCBI-ProteinID:
QCT01154
UniProt:
A0A4V1G3G9
LinkDB
All DBs
Position
complement(484566..486992)
Genome browser
AA seq
808 aa
AA seq
DB search
MTHFFKRPFGSQRRDLPFAGLTSSRSSRELVRSTDRDAPFFRGLEEQGLFLNAAQIQAVR
HGEGPLLTLAGAGSGKTSVLVSRSGHLIAAGGADPGSILLVTFSSKAAAEMKERIRALPG
IRNREAEQVTARTFHSFFLYILRTRGYRQEILSNTRHQQFIVKRILREMGLADRYEAETL
LSLWSAYRLNMAGLDELPASTPAEVETRQVFARYETWKEEHGQMDFDDILVWAHRLLQND
QPLLHSLQRRFRYVMVDEFQDTGLLPYELIRMLVKPHRNLMVVGDDDQTIYSFNGARHEF
ILHFDQAFPGARVITLDINYRSLSSIVGLGNEIIQHNQLRRPKTLQSTRKSDQVPLYLRP
NDPDEEASLLLSSIQESVNENRRPYGDYCILYRTSHNSRAIFEQLVLAGLPFIHYEQNDL
FYEQWMVKPVMEHLRLSLDRRNFQALGGILPTLYINRERGMEHILQQDTPRPKKGPLSHL
LTFPGLKDFQIEQVRERSKLIKSLKLMEPAEAIREIRVRFYDKFMEADRGKDLTLHKEFI
QEGLDELEASAKRFKDIPSFLAFVDALIEVHGDMMHRKKDEHADAIKLMTIHKSKGLEFP
VVCLIGASDGILPHTSALQAAQRDDSRPLTAREQKGDEALEEERRLAYVAVTRARDELII
SSPGYYRGRKMEVSRFLQSVFHIKAQPESGDGRTGSGGPAASDGAGRRWALQRTDAAAPA
AGRRGAKPAGRGAAQASTAPVTPQRAPAEPVRAWVCSGAGCRGWQRMDHPAGPSSAAVPA
GSKACPLCGAPMQAGMKQAPAAGRRPPG
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgactcatttctttaaacgacccttcggcagtcagcggcgtgaccttccctttgcaggg
ctgacctcctcccgcagcagccgcgagctggtgcgcagtacagaccgggatgctcccttc
ttccgcggcctggaggagcaggggctgttcctgaatgcagcgcagattcaagcggtacgc
cacggagaaggcccgctgctgacgctggccggagcgggctccggcaagacgtccgtgctg
gtcagccgctccgggcatctcattgctgccggcggagcagaccccggctccatcttgctg
gtcacattctcctccaaggctgcagccgaaatgaaggagcggattcgggcactgccgggc
attcgtaatcgggaggccgagcaggtaacagcccggacctttcattcgtttttcctgtac
attttgcgcacgcgcggctaccggcaggaaattctgagcaataccaggcatcagcaattc
atcgtgaagcggattttgcgggagatgggccttgcggaccgctatgaggccgagacgctg
ttatcgctgtggtccgcctatcgcctgaacatggcaggactggacgagcttccggccagc
accccggcagaggtggagacccggcaggtttttgccagatatgagacgtggaaggaagag
catggccagatggattttgacgatattcttgtctgggcccaccgccttctacagaacgat
cagcccctgctgcattcactgcaacgccgcttccgttacgtcatggtcgatgaattccag
gataccggcctgctgccctatgagcttatccgaatgcttgtgaagcctcatcgcaatctc
atggtggtgggagatgacgatcagaccatttacagcttcaacggcgcccggcatgagttt
attcttcactttgaccaagcctttcccggtgccagggtcattaccctggacatcaattac
cgctcgctgtcgagcattgtggggctgggcaatgagatcatccagcacaaccaacttcgg
cgccccaaaacactgcaatccacccgaaaaagcgatcaggtcccgctctacctccgcccc
aatgatccggatgaggaggcctcgctcctgctgagctcgatccaggagtccgtaaatgag
aaccgcagaccatacggggattactgtatcctgtaccggacctcgcataacagccgggcc
atattcgagcagctggtgctggcgggacttccgtttatccactatgagcagaacgatctg
ttctatgagcagtggatggtgaagccggtgatggagcatctgaggctgtcgctcgatcgt
cgcaatttccaggcgctgggcgggattttgccaacgctgtatatcaaccgggagagaggg
atggagcatatcctgcagcaggacaccccccgccccaaaaaaggtcccctctcccatctg
ctcaccttccccggcttgaaggattttcagatagagcaggttcgggagcggtcgaagctg
attaaatctctgaagctcatggagccggcagaagcgattcgggagatccgggtgcggttc
tacgacaaatttatggaagccgaccggggcaaggatctgacgctgcataaggaattcatc
caggagggactggatgagctggaggcgtccgccaagcggttcaaggatattccctccttc
cttgccttcgtcgatgcattgattgaggttcacggggacatgatgcaccgcaaaaaggat
gagcatgccgacgccatcaagctcatgaccattcacaagtccaaggggctggagtttccg
gtggtctgcctgatcggcgcgtctgacggcattctgccgcacacctccgccctgcaggct
gcacagcgcgacgacagccgcccgctcacggcccgggagcagaagggcgacgaggcgctg
gaagaggagcggcggcttgcttatgttgccgtcacccgcgcccgtgatgagctgatcatc
agctcgccgggctactaccggggacggaagatggaggtatcgcgctttcttcagagcgtc
ttccacatcaaggcgcagccggagagcggggatggacgcactggcagcggcggcccggct
gccagcgacggtgcgggcaggcgctgggcgctgcagcgcacggacgccgcggcccccgct
gccgggcggcgcggcgcgaagccagcaggccgcggcgcggcgcaagcaagcacggcgccg
gtgaccccgcagcgggcgccggccgagccggtccgcgcgtgggtgtgcagcggggccggc
tgccgtggctggcagcgcatggaccacccggcgggcccgagcagcgcggcggtccccgct
ggcagcaaggcctgcccgctgtgcggcgcgcccatgcaagcgggcatgaagcaggcacct
gccgccggcaggcgcccgccaggctag
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