Paenibacillus algicola: E6C60_0745
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Entry
E6C60_0745 CDS
T07807
Name
(GenBank) ATP-dependent DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
palo
Paenibacillus algicola
Pathway
palo03420
Nucleotide excision repair
palo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
palo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E6C60_0745
03430 Mismatch repair
E6C60_0745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palo03400
]
E6C60_0745
Enzymes [BR:
palo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E6C60_0745
DNA repair and recombination proteins [BR:
palo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E6C60_0745
MMR (mismatch excision repair)
Other MMR factors
E6C60_0745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
Viral_helicase1
UvrD_C_2
AAA_12
AAA_11
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QCT01466
UniProt:
A0A4P8XGA3
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All DBs
Position
823215..824990
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AA seq
591 aa
AA seq
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MDKVKVISSDESISELSGHFKVIAGPGAGKTHWLVTHIQNVLQNVKELTAASKIACITYT
TVAGEEIQKRLGINQNKVEVSTIHSFLYANIVKPYIYLLKDDNGDMLVNVEELDGHDENI
ATKGKIYVWQQEARNGYLTDKQKIKKCLENLDWKLEENGINLKPRKPYLSKIGRYSIKSE
ELLIYKRLFWKEGVIHHEDVIYFAYIILEEYPLLIDHIRSKYPFVFLDEFQDTNPIQTEI
IKKLGNAGSVIGVIGDPAQSIYEFQGASRQDFISFSLPNQTMYSIENNRRCGSKIVDFLN
YIRIGDELEQKPLRDDSEIDVYFYECNEAGDDNITRFHELRSRFRLNGDYCILARNNDLV
KQLRNAEAEDIWTSFNEIDSNRERFIKKMFTAFKLVNDNRQEAGVKELIKIFKTDKDGIL
KEPFQEYQYVSPVMKRSLAVDLLEFMACGMVKFQDKSLYEFYEALSGLLKVKNYGIKKIT
RGRIKEFSDSTSIKLLLDNLILPEEKSSEIRTIHKAKGMEFESVLLYFSDNEEVKRLISP
DISSEKDDTRILYVALSRAKDLLCIACPPLDTETKTILSSMNLMEVDLVMP
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggataaagttaaggttatctcttctgatgagagtatttcagagttatcgggtcatttc
aaagtcattgctggtccaggtgcgggaaaaacacactggcttgttactcatatccaaaat
gtccttcaaaatgtgaaggaacttacagccgcatcaaagattgcatgcattacatataca
accgtggcaggagaagaaattcaaaaacgattaggaatcaatcagaataaagtagaagta
tctactatccacagttttctctatgcaaatattgttaagccctatatatatctattaaaa
gacgataatggggatatgttagtcaatgttgaagaattagacggccatgacgagaacata
gccacaaaaggtaaaatatacgtttggcagcaagaagcgagaaatggatatttgactgat
aagcaaaaaattaaaaaatgcttagaaaacttggactggaagcttgaagagaatggaatc
aatttgaaaccaagaaaaccctatttaagcaaaataggtaggtacagcattaaatcggaa
gaattgcttatttacaagagactgttctggaaagaaggtgtaattcaccacgaagatgta
atttacttcgcatacataattctggaggaatacccactactcattgatcatataaggtcc
aaatatccgtttgtttttctggatgaatttcaagatacgaatccgattcagactgaaata
attaagaaattgggcaatgctggctctgttattggggtaattggagatcctgctcaatca
atttatgaatttcaaggagcttcacggcaggactttatttcattttctcttccaaatcaa
actatgtattcaattgagaataatagaagatgtggcagtaagattgtagactttctaaat
tacattaggattggcgatgaactggaacaaaagccattgagagatgatagtgaaattgat
gtatatttttatgaatgtaatgaagctggagacgacaacataacaaggtttcatgaattg
agaagtaggtttaggcttaatggcgactactgtatattagctcggaataatgacttagtt
aagcaactgcgaaatgctgaggcagaggatatctggacaagttttaatgaaattgattct
aatagagaaaggtttattaagaagatgtttactgcatttaaattagtgaatgataaccga
caagaggctggagttaaggagcttataaaaatttttaaaactgacaaggatgggatttta
aaagagccttttcaggaatatcagtatgttagccctgttatgaaacgaagcttggctgtg
gatttacttgaatttatggcgtgtggtatggtgaaatttcaagataaatctttatatgaa
ttttatgaagctctctctggattgttgaaggttaaaaattatggtattaagaagatcaca
agggggagaattaaagagttttcagattctacatcaataaagttgctattagataatctc
attttgccagaagaaaaatcatcagagatacgaacaatacataaggcaaaagggatggaa
tttgaatcagtattgttatatttttcggataatgaggaagtaaaaagacttattagtcct
gatattagttcagaaaaagatgatacacgaattttatatgttgcattgagtagggcaaag
gatttgttatgtattgcatgtccgcccttagacactgagacgaaaaccatacttagttca
atgaatttaatggaagtggacttagtgatgccataa
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