Paenibacillus algicola: E6C60_1455
Help
Entry
E6C60_1455 CDS
T07807
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
palo
Paenibacillus algicola
Brite
KEGG Orthology (KO) [BR:
palo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palo03400
]
E6C60_1455
Enzymes [BR:
palo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E6C60_1455
DNA repair and recombination proteins [BR:
palo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
E6C60_1455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
QCT02171
UniProt:
A0A4P8XL32
LinkDB
All DBs
Position
1614810..1618301
Genome browser
AA seq
1163 aa
AA seq
DB search
MSVRFLIGRSGSGKSTRMRKEIASRLAEAPQGNPLILLVPEQGSFDAEHALVTAPGVRGS
LRAQVLSFRRLAYRVMQETGGAAKVVIGEEGKRMLLYKIIQRRKDELNLFGASGEQLGFV
GKLSQLYTEMKRYCVDASCVQEQLEQMASTSTSPPLLRRKLEDILAVYRDFEQEMAPLYK
DDEDTLAALADCVRESSYIRDADLWIDGFNGFTPQEYIVLRELMNHARSVTIALTLDKPY
PEGMTPHELDLFHPTAVTYSKLRGAAGEAGLDVEHTVLDAEQLPRFKDSPALAHLERGFD
RRLKWSGSSPPEGIKLYAAGNRRAEVEGALREMLRLARQGARYREMAVLTRNPGDYQFLI
GPLFRDYGIPYFLDQKRNELHHPLVEFIRSALEVAVRRWRYEDVFRCIKTDLLLPLDGSL
SREDMDRLENHVLASGIHGTRWTDGKPWRGMPSLSLEDEGRSHREEGLQLIEQCRLAVTV
PLQAFDKRLKQGATAKDKCTAVFRLLEEAMIPEKLELMSRAALNEGRPEAAREHRQVWSA
VLEVLDQIVEMMGGERFSAEAFAGILDTGLSELELALVPPALDQVLVGTMDRTRTGDVKY
VFLLGVNDGVIPAQFQDDGILSEQERVTLEASGMELAPNISRRLLDERFVIYSALTTASR
QLWISYPSADQEGKTLLPSELIRHIKGMFPLKEAVLPLRPHGGMSSQEQSDFVAGEMRSL
AFLTARLRDWKHGEPLPPLWWEVYNWYARSPAWRSQLDQQLSSLSYRNETAQLEAETSRR
LYGSRIRSSVSRMERFVACPFSHFASHGLKLAERQTYRLQAPDIGQLFHAALSDMASRFR
EQKRSWGDLSPEECLREAEATVDRLAPKLQGEILLSSKRYGYISRKLKSIVGRASIILGE
QSRRGSFEPVGLELDFGPGKDIPPLRFELPGGVEMEIIGRIDRVDMARSENGLLLRVIDY
KSSQKDLKLHEVYYGLSLQMLTYLDVLLTFAEDWLGESALPAGTLYFHVHDPVLQSPNGL
TADQAAEELLKRFKMKGLLLADREAVSLMDAGLEKGHSSIIPVAVKADGSFYSSAAVADP
EQWQSLLRTVRQNIVSIGSRITGGEVKIEPYRIQQETACTYCSYRPVCQFDESMEGNQYQ
LLKKPGKDQIWEWLGHEKGADAQ
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagttcgttttttgatcggccgttccgggagcggcaagagcacccggatgagaaag
gaaatagccagccgccttgctgaagctccgcagggcaaccccttgattctgctcgtgccc
gagcagggctcatttgatgcagagcatgcgctcgtgactgctccgggcgttcggggctcg
cttcgggcgcaggtgcttagcttccgccgcctggcgtatcgggtcatgcaggaaactggc
ggagcggcgaaagtggtgatcggtgaagagggcaaacgcatgctcttgtacaaaattatc
caaaggcgcaaggatgagctcaacctgttcggcgcctccggggagcagctcggctttgtt
ggcaagctcagccagctgtataccgagatgaagcgctactgcgtagatgcctcctgtgtg
caggagcagctggagcagatggcgtccacaagtaccagcccgccgctgctaaggcgcaag
ctggaggatattttggcggtgtatcgggatttcgagcaagagatggctccgctgtacaag
gacgatgaggatacgctggctgcacttgcagactgtgtccgggaatcctcctatatccgg
gacgctgacctgtggattgacggctttaacggatttactccccaggaatatattgtactg
cgggagctgatgaaccatgcccgctcggtgaccatcgccttgacgctggacaagccttac
ccggaaggaatgactcctcatgagctggatctgtttcatccgacggcggtaacgtacagc
aagctgcggggagcggcgggcgaggcagggctggacgtggagcatacggtgctggacgca
gagcaactcccccgcttcaaggacagccccgcgctggcgcatctggaacggggctttgac
cgcaggctaaagtggagcggaagcagcccgccagagggcatcaagctctatgctgcgggg
aaccgccgggccgaagtggaaggggcgctccgggaaatgctccggcttgcacggcaaggt
gcccgctatcgggaaatggctgttctgacccgcaatccgggagattatcaatttctcatc
ggtcccttgttccgtgattacggcattccttatttcctggatcagaagcgaaatgagctg
catcatccgctcgtagagtttatccgttccgcgctggaggttgcggtgcggcgatggcgg
tacgaggatgtgttccgctgcataaagacggatttgctgctgcctttggatggcagcctg
tcacgcgaggatatggaccggctggagaatcacgttctggccagcggtattcatggcacg
cggtggacggacggaaagccgtggcgaggcatgccgagcctttcgttggaggatgaagga
cggtcgcaccgggaggaaggtctgcagctcattgagcagtgccgattggccgttaccgtt
cctctgcaagcttttgacaagaggctgaagcagggcgccaccgcgaaggacaaatgtaca
gcggtattccgcctgctggaggaggccatgattcccgagaagctggagctgatgagccgc
gccgcactgaatgagggaaggccggaagctgcccgggagcatcgccaggtatggagcgca
gtgctggaggtgctggatcagattgtggagatgatggggggcgaaagatttagcgccgag
gcctttgccggcatcctggataccggtctgtcggagctggagctggccctcgtgccgccg
gctttagatcaagtgctcgtgggcacgatggaccggacgcggaccggagatgtcaaatat
gtgtttctgctgggtgtgaacgatggtgtgatcccggcgcagttccaggatgacggcatt
ttgtccgagcaggagcgggtgacgctggaggcatccgggatggagcttgcacccaatatt
tcacgccggctgctggatgagcgatttgttatttactcggcgctgacaacggccagccgg
cagctgtggatcagctatccatctgctgatcaggaaggaaagaccctgctgccatccgag
ctgatccggcatatcaagggcatgttcccattgaaggaggccgtgctgccgttaagaccg
catggcggaatgtcatcgcaggagcagtccgacttcgtagcaggagagatgcgatctctt
gccttcctgaccgcacggctgcgggactggaaacacggggagccgctcccgccgctctgg
tgggaggtatataactggtatgcgagaagtccggcctggcgcagccagctggaccagcag
ctctcctcgctctcctacaggaatgagaccgcccagctagaggccgaaacgagccgcaga
ctgtatggcagccgtattcgttcaagcgtctcccgcatggagcggtttgtggcttgtcca
ttttcccactttgcttctcacggcttgaagcttgccgagaggcagacataccgacttcag
gcgcctgatattggccagctctttcatgcggcgctcagcgatatggcttcccggtttcgg
gagcagaagcgaagctggggcgatctgagtccggaggaatgtctgcgggaagcagaagcg
accgttgaccgtctggcaccgaagctgcagggcgaaattctgctcagctccaagcgctac
ggctatatttcccgaaagctgaagagcattgtggggcgggcctccatcattctgggcgag
caatccagacgggggagctttgaaccggtcgggctggagctggatttcggaccgggcaag
gacattcctccgcttcgttttgagctgccgggaggcgtcgaaatggaaattattggccga
attgaccgtgtcgatatggcgcgcagtgagaacggactgctgctgcgggtgattgactat
aaatccagccagaaggacctgaagctgcacgaggtgtattacggcctttctctgcagatg
ctcacctacctcgatgttcttcttacttttgccgaggattggctgggtgagagcgcactg
cccgccgggacactgtatttccacgtccatgatccggttctgcagtctcccaacgggctg
actgcagatcaggcggccgaggagcttttgaagcgtttcaagatgaaggggctgctgctg
gctgaccgggaggcggtctcgctcatggatgcaggactggagaagggtcactcctccatc
atcccggtcgccgtcaaagccgatggaagcttctatagcagcgctgctgtcgcggatcca
gagcaatggcaaagcctgctgaggacagtccggcaaaatatcgtcagcattggctcaagg
attacaggcggcgaagtgaagattgagccttaccggattcagcaggaaacggcttgcacg
tactgctcttaccggccggtttgtcagtttgatgaaagcatggaaggcaatcaatatcag
ctgctgaagaagccgggcaaggatcaaatctgggaatggctgggccatgagaagggagca
gatgcacagtga
DBGET
integrated database retrieval system
