Paenibacillus algicola: E6C60_2048
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Entry
E6C60_2048 CDS
T07807
Name
(GenBank) apurinic endonuclease Apn1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
palo
Paenibacillus algicola
Pathway
palo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
palo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E6C60_2048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palo03400
]
E6C60_2048
Enzymes [BR:
palo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
E6C60_2048
DNA repair and recombination proteins [BR:
palo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
E6C60_2048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QCT02763
UniProt:
A0A4P8XKB0
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All DBs
Position
2194872..2195732
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AA seq
286 aa
AA seq
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MNFTHTTPKVGGHVSTQGGYAAAARRALQMGGDAFQYFPKNPRRLHVKTPDFHDCLSCRA
FCEEHGLVSVAHTPYPVNMAAGLLKGKEHYRLTVDCLINDLIIAEACGSLGIVVHFGHGS
SQDQLTAYQNMIRCMNEVLREWNGQAKLLIENQAGDHGDMGITLEECVKVRELSSSPDQI
GFCLDTCHWFASGQWQGENTAQLLKRGSELGYWESLALVHLNDSKYGAGSRKDRHERVGR
GRIGKECLQSLLQSRELADKVFILETEKGEDGTHRQDIAKVRSWLN
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcacacataccacacctaaagttggcggacacgtaagcactcaaggcggatat
gctgccgctgctcggcgagccttgcagatgggcggtgacgcctttcaatatttcccgaag
aacccgcgccggctgcacgtaaaaacccctgattttcacgactgcctgtcatgcagagcc
ttttgcgaggagcatggacttgtttctgttgcgcacacgccttatcctgtgaatatggct
gctggtctgttaaagggaaaagagcattaccggctgactgtggattgtctgatcaatgac
ttgatcattgcggaagcttgcggctccctcggaatcgtggtgcattttggtcacggcagc
agtcaggatcagcttactgcctaccagaatatgattcgctgcatgaatgaggtgctgcgt
gagtggaacggacaagccaagctgctgattgagaaccaggcgggtgaccatggcgatatg
ggtatcacgcttgaagaatgcgtgaaggtgagagagctgtcttcgtctccggaccaaatc
ggcttctgtctggatacctgtcattggtttgcctccggacagtggcagggggagaatacg
gctcagcttttgaagcggggctcagagctcgggtattgggagtcattggctctcgttcat
ctgaatgactccaaatacggagccggctcccggaaggatcgtcatgagcgtgtggggcgc
ggcaggattggaaaagagtgtctgcaaagcttgctgcagagcagggagctggctgataaa
gtgtttattttggaaacggaaaaaggcgaggacggaactcaccggcaagatattgccaaa
gtgagatcctggctgaactaa
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