Paenibacillus algicola: E6C60_2457
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Entry
E6C60_2457 CDS
T07807
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
palo
Paenibacillus algicola
Pathway
palo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
palo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E6C60_2457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palo03019
]
E6C60_2457
03016 Transfer RNA biogenesis [BR:
palo03016
]
E6C60_2457
Enzymes [BR:
palo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
E6C60_2457
Messenger RNA biogenesis [BR:
palo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
E6C60_2457
Transfer RNA biogenesis [BR:
palo03016
]
Prokaryotic type
tRNA degradation factors
E6C60_2457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
OB_RRP5_4th
S1_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
QCT03169
UniProt:
A0A4P8XRN1
LinkDB
All DBs
Position
complement(2619205..2621298)
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AA seq
697 aa
AA seq
DB search
MEQRVEMQLGGRKLVLETGRLAKQANAAVMVRYGDTAVLCTVTASSAPKDLDFFPLTVNY
EERLYAVGKIPGGFIKREGRPSEKAILASRLTDRPIRPLFPEGFRNDVQVLNLVMSVDQD
CEPEIAAMIGTSAALSISDVPFNGPIGGVAVGRVNGEFVVNPTIAQQEASDLYLVVAGTK
DAIMMVEAEANEVPEEVMLEAIMFGHDEIKQIVSTISELVAAAGKEKMEVKLHAVNETVN
SEVRKFAEQRLVEAVRIEEKHARQDAIDAISDEAYTVFEEKYLETPELLKDVKEVLHDIV
KEEVRRLITHDKVRPDGRGLSEIRPIDCDTGLLPRTHGSGLFTRGQTQALSVCTLGALGD
VQILDGIDLEETKRFMHHYNFPPFSVGEARPLRAPGRREIGHGALGERALSKVIPNEVEF
PYTIRLVSEVIESNGSTSQASICASTLAMMDAGVPIKAPVAGVAMGLIKDGEHVSILTDI
QGMEDHLGDMDFKVAGTQQGVTAIQMDIKIDGIDRSILQEALEQAREGRMHILGKMLEAI
QQPREALSPYAPKIITMQINPDKIRDVIGAGGKIINKIIEETGVKIDIEQDGRVFIASSN
AEMNQKALSIIEGIVREVAVGEIYTGTVKRIEKFGAFVEILPNKDGLVHISQLSTERVGK
VEDVVAIGDVITVKVTEIDQQGRINLSRKAVLTAEAN
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggaacaacgtgttgaaatgcagctgggtggaagaaagctggtactcgagaccggcaga
ttggccaagcaggccaatgcagcagtcatggttcggtacggagatacagccgtgctttgt
acggtaacagcctccagtgctccgaaggacctggattttttcccgctgacggtgaactat
gaggaaagattgtatgctgtcggcaaaattccgggaggattcattaaacgcgaaggacgc
cccagcgagaaagccattctggcaagccgcctgacagaccgcccgattcgccctctgttc
cctgaaggcttccgaaatgatgtgcaggtgcttaatctggtgatgagcgtggatcaggac
tgcgagcctgagattgctgccatgattggtacctctgccgctctcagcatctccgacgtt
ccgtttaacggaccgattggcggagtagcagtgggacgcgtgaacggcgagttcgtcgtg
aatccgactattgcacagcaggaagcaagtgatctgtacctggttgtagccggtaccaag
gacgctattatgatggttgaagccgaagccaatgaggttccagaagaagtgatgctggaa
gcaattatgtttggccacgatgagatcaagcagattgtgtccaccatcagtgagcttgta
gctgcagccggcaaggaaaagatggaagtcaagctgcacgcggttaacgaaactgtaaac
tccgaggttcggaagtttgccgagcagcgtctggtagaggctgtacgcattgaagagaag
catgcccgccaggatgccatcgatgccatcagcgatgaagcatacactgtatttgaagag
aagtatttggagacgccggagcttctgaaggatgttaaggaagtgctgcatgacatcgtg
aaggaagaagtccgccgccttattacccatgataaggtgcgcccggatggccgcggtctt
tccgagatccgtccaatcgactgtgatactggcctgctgccaagaactcacggatcagga
ctgttcacgcgtggacaaacccaggctcttagcgtgtgtacgcttggcgcattgggagac
gtgcaaattctggacggtattgatctggaagaaacgaagcgtttcatgcaccattacaat
ttcccgccgttcagtgtgggtgaagctcgtccgcttcgcgcaccgggccgccgtgaaatc
ggacatggagctttgggtgagcgcgcattatccaaggttattccgaatgaagtggaattc
ccgtatacgattcgtctcgtttctgaagttatcgaatccaacggctcgacatctcaggcg
agcatctgtgccagcaccctggctatgatggatgccggcgtaccgatcaaggctcctgtt
gcaggtgttgccatgggcttgatcaaggacggagagcatgtttccattctgactgacatc
caggggatggaggatcatttgggagatatggactttaaggttgcgggaacccagcaaggc
gttacggccatccagatggatattaagattgatggcatcgaccgtagcattttgcaggaa
gccttggagcaggcaagagaaggacgtatgcatatcctgggcaaaatgcttgaagcgatt
cagcagccgagagaggcactttctccttatgcaccaaaaatcatcacgatgcagatcaat
ccggacaagattcgcgatgtgatcggtgccggtggcaaaattattaacaaaatcatcgaa
gagaccggcgtgaaaatcgacatcgagcaggatggccgtgtattcatcgcttcatccaat
gccgaaatgaaccagaaggccctgtccattattgagggcattgtgcgtgaggttgcggtg
ggtgaaatctataccggaacggtgaagcggattgagaaattcggcgccttcgttgagatt
ttgccgaacaaagacggtctggtacacatttctcagctttctaccgagcgtgtgggtaaa
gtagaagatgtggtagccattggagatgtgattacagtgaaggttaccgaaatcgatcag
cagggccggatcaacctgtcccgtaaagctgttctgacggctgaagccaactaa
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