Paenibacillus algicola: E6C60_2468
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Entry
E6C60_2468 CDS
T07807
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
palo
Paenibacillus algicola
Pathway
palo03030
DNA replication
palo03430
Mismatch repair
palo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E6C60_2468
03430 Mismatch repair
E6C60_2468
03440 Homologous recombination
E6C60_2468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palo03032
]
E6C60_2468
03400 DNA repair and recombination proteins [BR:
palo03400
]
E6C60_2468
Enzymes [BR:
palo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E6C60_2468
DNA replication proteins [BR:
palo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E6C60_2468
DNA repair and recombination proteins [BR:
palo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E6C60_2468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NI
HHH_6
DNA_pol3_a_NII
tRNA_anti-codon
RNase_H_2
DNA_pol_A_exo1
HHH_3
DnaX_C
Motif
Other DBs
NCBI-ProteinID:
QCT03180
UniProt:
A0A4P8XN99
LinkDB
All DBs
Position
complement(2630289..2634611)
Genome browser
AA seq
1440 aa
AA seq
DB search
MGTADIKEKRNRFELLMRQGEVPAGLVDPYFLDGIIEKVEISQENREWLITLHKDSLVPA
EVYRSFCLRIQEKLNHIAKIRFQFVYQGSVTPAEVIQEYWRLFLEWVHRQIPSVNGWMAR
ASHELNDGLLTVQMPDSMALELARKKQIDEALMTFFKQYFALELRVKLQLGEQQDQAALA
EFEQKKREEEREVIERMMSTLEADPLPEEEEGEVRLQIGYDIKDHPVSIQNIQDEEKKIT
IQGTIFGLDRKELRNGSTLFTYNVTDFSDSLQMKMFAKTKDDLKVMSLLENGKWVKARGR
VEYDRFMQVPELVMMPSDLVEVKAPAARKDQAELKRVEFHLHTTMSTMDAVTPIDKYVKT
AAAWGHKAIAVSDHGGVQCFPDADKHAKKNGIKMIYGIEANVVNDAVNVVEQAKPLELHH
ATYVVFDIETTGLSITQNKITELAAVKMQEGKEIDRYATFVNPHEKIPYHIQQLTNITDE
MVKDAPDLEPVLEEFVKFVGDAVLVAHNARFDMGFIQASLKNAGMNTLDNPYLDTLELAR
MLHPGMKNHRLNTLADKYKVLLESHHRAIDDTIALAGILNGLLSDVEKLKGIKMLDRLND
YVGTDLSNTRPFHCGIYAQNMIGKKNLYKLVSMSHTQHFKRVPCIPKSKLVEMRDGLIIL
SGCEKGEFFESVLNKTVEEAEEVAQFYDVLEVQPLTMYMHLVDKGLVGSPEELKTAVQKI
IAIGEKLDKPVIATGNVHYLEPRDKLFRDITIHGITGFSPLKDLRKPDAHFRTTQEMLDE
FQYLGAEKAFEIVVKNTNDLADRFEEIELFPSKLFTPILDGADEEIRNTCYETAKSIYGE
DLPEVVVARLEKELEPIIKYGFSANYLISEKLVKKSNQDGYLVGSRGSVGSSVVATFLGI
SEVNPLPAHYICLDKECKHSEWFLDGSVPSGFDLPDKACPKCGGRLKGEGQDIPFETFLG
FKGDKVPDIDLNFSGEYQPEAHNYTKVMFGEKNVFRAGTIGTVAEKTAFGFAKKYEEEHQ
KRWRGAELNRLAGGCTGVKRSTGQHPGGIVVVPDYMEVEDITPVQFPADDVKAEWKTTHF
DYHAFDANLLKLDILGHDDPTMMRMLQDLTGVDPTTIPMNDPKVMSMFNSTEALGVTPEQ
IRSPVATYGVPEMGTKFVRQMLIESQPSSFADLLQISGLSHGTGVWLGNAQELIKNGTCN
IKTVIGCRDDIMLFLIYKAGMDASLAFKITESVRKGKGLSQEWIDEMKRCKVPQWYIDSC
LKIQYMFPKAHAAAYVISAVRTAYFKLYYPIEYYATYFSVRAEDFDIELCCQGYDAIHKR
IIEIEQLGFQASTKEKSMLSILEMALEMTARGFTFKNIDLYRSDALRFTVEGDCLIPPFS
ALQGIGDNAARNIAAAKEQGEFLSIEDFQQKSKASKTAVELLTQMGCFRGLPESNQLSLF
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgggcacagcggacataaaggaaaaaagaaacaggtttgagctattgatgaggcagggc
gaggtgccggccggcttggtggatccgtattttttggacggaatcattgagaaggttgag
atctcgcaagaaaaccgggagtggctgatcaccttgcacaaagacagcttggtgcctgct
gaggtatatcggtccttctgtcttcgtattcaggagaagctgaatcatattgcaaaaatc
cggtttcaattcgtgtatcagggatcagtaacaccagctgaggtgattcaggagtattgg
cggctgtttctggagtgggtacaccgccaaatcccgtccgtgaacggatggatggcgcgg
gcaagccatgagctgaatgacgggctgctgactgttcagatgcccgatagcatggcgctg
gagctggcacggaagaagcagatcgacgaggcgctgatgacctttttcaagcaatatttc
gcactggagctcagggtgaagctgcagctgggtgaacagcaggatcaagccgccctggcc
gagtttgagcagaagaagcgggaggaagagcgggaagtcattgagcgcatgatgtccacg
ctggaggcagacccgctgccggaggaagaagaaggagaggtaaggctgcagattggctat
gacattaaggatcatccggtgtccattcagaatattcaggatgaagagaagaagattacg
attcaaggtaccatcttcgggctggaccgtaaagagcttcgtaatggcagcacactgttt
acgtataatgtgaccgacttcagcgactccctccagatgaaaatgtttgccaaaactaag
gatgacctcaaggtcatgagtctgctggagaacggcaagtgggttaaagcacggggacgg
gtggagtatgaccggtttatgcaggtgcccgagctggtcatgatgccgtcggatctggtg
gaggtgaaggctcctgctgcacgtaaagatcaagcggagctcaagcgggtagaatttcat
ctccatacgacaatgagcacgatggatgctgttactccgatcgataagtatgtcaaaaca
gcagcagcctgggggcataaagcgattgcggtcagcgatcatggcggggtccagtgcttt
cccgatgcagacaagcatgccaagaagaatggcatcaaaatgatctacggcattgaggcg
aacgtcgtaaatgacgcggtcaacgtagtcgagcaggccaagcctttggaattgcatcat
gccacctatgttgtatttgatatcgagacgaccggcttatccatcacgcagaacaaaatt
acggagcttgccgccgtaaaaatgcaggagggtaaggaaattgaccgctatgctaccttc
gtaaatccgcacgagaaaattccgtaccatatccagcagctgacgaacattactgatgaa
atggtcaaggatgctccggatctggagcctgtgctggaggagttcgtgaagttcgtaggc
gatgcggtgctggttgcgcacaatgcgagattcgatatgggcttcattcaggcttccttg
aaaaatgccggcatgaatacgctggataatccgtacctggatacgctggagctggcccgg
atgctgcatcccggcatgaagaaccaccggctgaacacgctggctgacaaatacaaggtg
ctcctcgaaagtcatcacagggccattgatgacactatagcgctcgcgggtatcctcaat
ggattgctgtctgatgttgagaagctgaagggcatcaagatgctggaccgactgaacgat
tatgtcggtacggatctaagtaatacgagaccgttccactgcggcatttacgcccaaaac
atgatcgggaagaaaaacctgtacaagctcgtatccatgtcgcatactcagcattttaag
cgggtgccgtgcattccaaagtcaaagctggtcgagatgagggacggtttgattattctc
tccgggtgcgagaagggcgaattttttgaatcggtactgaacaagactgtagaggaagca
gaggaggttgcccagttctatgatgtgctggaggtgcagccgctgacgatgtacatgcac
cttgtggacaagggactggtcggcagtccggaagagctgaaaacagcggtccaaaaaatt
atcgccattggagaaaagctggataagcccgtcattgctaccgggaacgttcattatcta
gagcctcgggacaagctgttccgcgacattacgatccatggcattaccggcttcagcccg
ctgaaggatcttcgaaagccggatgcccatttccgcacgacccaggagatgctggatgaa
tttcaatatttgggagcagagaaggcctttgagattgtcgtcaaaaataccaacgatctg
gcagaccgcttcgaagaaatcgagctgtttccgagcaagctgtttacaccaattctggac
ggagcagacgaggaaatccgcaacacctgctatgaaaccgcgaagtctatctatggagag
gatctgccggaggttgtggtcgcccgtttggagaaggagctggagcctatcatcaaatac
ggcttctctgcgaactatctaatttccgagaagctcgttaaaaaatcaaaccaggacgga
tacttggtcggctccaggggctctgtagggtcctctgtagtagctaccttcctaggcatt
tccgaggttaatccgttgcctgcgcactatatctgtctggataaagaatgcaagcacagc
gagtggttcctggacggcagtgtcccgagcggcttcgatttgccggataaggcttgtccg
aagtgcggagggcgattgaagggcgaagggcaggatattccgtttgagaccttccttggc
tttaagggagataaggtgccggatatagacttgaacttctccggcgaatatcagcctgaa
gcgcataactacacgaaggtcatgttcggtgagaaaaatgtgttccgagcgggaaccatt
ggtaccgttgcggaaaaaaccgccttcggctttgccaagaaatatgaggaagagcatcag
aagcgctggcgcggcgctgagttgaaccggctggccggcggctgtaccggcgttaagcgc
agcaccggccagcatccgggcgggatcgtggttgtgccggattatatggaggttgaagat
attacccccgtccagtttccggcggatgacgtcaaggcggaatggaagaccacgcatttc
gattatcatgcctttgatgccaatttattgaagctggatattctgggccacgatgatcca
acgatgatgcggatgctgcaggatttgactggcgtagatccgacaacgattccaatgaat
gatcccaaggttatgagcatgtttaactctacagaagcgctgggtgtaactccggagcag
attcgctctccggtagcaacctatggggtgccggagatgggtaccaagttcgttcggcaa
atgctgattgaatcgcagccatcaagctttgccgatctgctgcaaatatcaggattgtcc
cacggaacgggcgtgtggctcggcaatgcgcaggagctgatcaagaatggaacttgtaac
atcaagacggttatcggctgccgtgacgatattatgctattcttgatttacaaggcaggg
atggatgccagtctggcgtttaagattacggaaagtgtacgtaagggcaagggattgtcg
caggaatggatcgatgagatgaagcgctgcaaggtaccgcagtggtacattgattcctgt
cttaaaattcagtacatgtttccgaaggcccatgcggccgcatatgtcatctcggccgtg
cgtacggcttacttcaagctgtactacccgatcgagtattatgccacgtatttctcagtc
cgggcagaggactttgacattgagctgtgctgtcagggctatgatgccattcacaagcgg
attatcgagattgagcagctgggattccaggcaagtaccaaggagaagagcatgctttcc
atactggagatggctctggaaatgacggctcgcgggttcaccttcaagaacattgacctg
taccgctctgacgcacttcgctttacggttgaaggcgactgcctgattccgccgttctcc
gccctgcagggaattggtgataacgcggcccgtaacatcgctgcggctaaggagcaggga
gagttcttatccattgaggatttccagcagaagtctaaggcaagtaagacggcggtggag
ctgttgacacagatgggctgcttccgcggactgccggagagcaatcagctttccctgttc
tag
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