Paenibacillus algicola: E6C60_2483
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Entry
E6C60_2483 CDS
T07807
Name
(GenBank) RNA polymerase sigma-28 subunit FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
palo
Paenibacillus algicola
Pathway
palo02020
Two-component system
palo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
palo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E6C60_2483
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
E6C60_2483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palo03021
]
E6C60_2483
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
palo02035
]
E6C60_2483
Transcription machinery [BR:
palo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E6C60_2483
Bacterial motility proteins [BR:
palo02035
]
Flagellar system
Flagellar assembly proteins
Stator
E6C60_2483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
PhyR_sigma-like
Sigma70_ECF
HTH_23
HTH_38
CtpB_N-like
Motif
Other DBs
NCBI-ProteinID:
QCT03195
UniProt:
A0A4P8XLL4
LinkDB
All DBs
Position
complement(2646641..2647429)
Genome browser
AA seq
262 aa
AA seq
DB search
MDSKKASALNHAELWTAWKEDGDLSAKKQLIEKYLHIVDYVSGRLAIGLPRNVSKGDLAS
NGVMGLIDAIDKFDYKRGLQFETYASWRVRGAILDSLRQGDWVPRSVREKAKKIETAYQQ
LEQKYLRTVSDTEMSEYLQVSEKEFRHMLQEVAVMTLNSLEDPIREEESETRMTLLVDEK
AKNPDHKVHEFYLKEALIKGIGKLTEKEKTVVSLLYYEDLSLSEIAEVMSLSPSRISQLH
SKAILRLRGALEKDKELLMHNE
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
ttggactcaaaaaaagcatcagccttgaatcatgcagaattatggacggcatggaaggaa
gatggagatctttcagcgaaaaaacagcttatcgagaagtatttgcatatcgtggattat
gtttcggggcggttggccattggcctcccccggaacgtgtctaagggagacttggcaagc
aatggagttatgggcctgattgacgccattgataaatttgattataaacgcggcctgcaa
ttcgaaacctatgcatcctggagggtgcggggggcgattttggattctctaaggcaaggt
gactgggtgccgcgctcagtccgtgaaaaagcgaaaaaaattgagacagcataccagcag
ctggagcagaaatatttgcgtaccgtcagcgataccgaaatgagtgaatatttacaggta
tctgaaaaggaattccgccacatgcttcaagaggttgccgtgatgacgctaaactctctg
gaggatcccattcgggaagaagagtcggaaacgagaatgacgctgcttgtggatgagaag
gccaaaaatccagaccataaggtacacgagttttatctaaaagaggcactaatcaagggc
atcggtaagcttacagagaaggagaaaaccgttgtttccttgttatattatgaggacctg
tctttaagtgaaattgcggaggtcatgtctttatctccatcgagaatatctcagctgcat
tcgaaagccattctacgcttaaggggggctcttgagaaagacaaagagctgttaatgcac
aatgaataa
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