Paenibacillus algicola: E6C60_2520
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Entry
E6C60_2520 CDS
T07807
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
palo
Paenibacillus algicola
Brite
KEGG Orthology (KO) [BR:
palo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palo03032
]
E6C60_2520
03400 DNA repair and recombination proteins [BR:
palo03400
]
E6C60_2520
Enzymes [BR:
palo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
E6C60_2520
DNA replication proteins [BR:
palo03032
]
Prokaryotic type
DNA Topoisomerases
E6C60_2520
DNA repair and recombination proteins [BR:
palo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E6C60_2520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Toprim_3
Toprim_2
EIF_2_alpha
Motif
Other DBs
NCBI-ProteinID:
QCT03232
UniProt:
A0A4P8XKI9
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All DBs
Position
complement(2678944..2681043)
Genome browser
AA seq
699 aa
AA seq
DB search
MADSLVIVESPAKAKTIGKYLGSKYIVKASMGHVRDLPKSQIGVEVENDFNPKYITIRGK
GSVLKELKDASKKVKKVYLAADPDREGEAIAWHLAHALELDETQSLRVVFNEITKTAVKD
AFKTPRKINMDLVNAQQARRILDRLVGYKISPLLWKKVKKGLSAGRVQSVAVKIILDREH
EISAFVPEEYWTITAKLAVKGSAFDAKFHKLDGSKKELGSEQDVNEVLSIIQKASFEVSE
VKERERQRHPSPPFTTSSLQQEAARKLGFRAAKTMSVAQQLYEGVELGKEGTVGLITYMR
TDSTRISETAQGEAKEFITGKYGTDYVPESPRQYAKKASNAQDAHEAIRPTSIERDPESM
KPFMSRDQMRLYKLIWDRFIASQMASAILDTMSVDIAAGRATFRATGSKVRFPGFMKVYV
EGNDDGTTEEENFLPALQSGDKLEHDSIEPKQHFTQPPPRYSEARLVRTLEELGIGRPST
YAPTLETIQKRGYVAIEEKKFMPTELGELVIEQMEQFFPEILNVEFTANMEEDLDHVEEG
AEDWVKVLGEFYKSFEKRLTVAEEEMKEIEIEDEVSDEICEKCGKPLVYKLGRFGKFLAC
SGFPDCRNTKPIIKDIGVTCPSCKEGHVVERRSKKGRVFYGCDRYPECEYVSWDKPSLKP
CPNCSSLMTEKKTRQGIKLQCTSCDHSEMMEEPEDGSDF
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
gtggcggattcactcgtcatcgtcgaatcgccggccaaggcgaaaacgattggcaaatat
ctcggcagcaaatatatcgtgaaggcttcaatgggccatgttcgtgatctgccgaagagc
caaatcggcgttgaggtcgaaaacgatttcaacccgaaatatattacgatccgcggaaaa
ggttcggttcttaaagagctgaaggatgccagtaaaaaagtgaaaaaagtatacctggca
gctgaccccgatcgcgaaggagaggccattgcctggcatttggcgcatgcgcttgaacta
gacgaaactcaaagcctgagagtcgtatttaatgaaattaccaagacggcggtgaaggat
gcattcaaaacaccgcgtaaaattaatatggatttagtaaacgcacagcaggcgcggcgg
attctggatcgccttgtgggatacaagatcagccctctgctgtggaaaaaagtgaagaag
gggctctctgccggccgtgttcagtccgttgcggtcaagattattctggatcgggagcat
gagatcagcgctttcgtacctgaggaatattggacgattacagcgaagctggcggtgaag
ggcagtgctttcgacgccaaatttcataagctggacggcagcaagaaggagctgggcagc
gagcaggatgttaacgaggtgctttcgatcattcagaaggcttcctttgaagtgagtgaa
gtgaaggaacgagagcgccagcgtcacccgtcgcctccatttacgacttcttctttgcag
caggaggcagcacggaagctgggcttccgcgcggcaaagacgatgtcggtggcccagcag
ctgtatgagggcgtagagctggggaaagagggaacggtcggcttgatcacctatatgaga
acggactccacgcggatctcggagaccgcccagggtgaagccaaggaatttattacgggt
aaatatggtacggattatgtgccagaaagcccgcgtcaatatgccaagaaagcttctaat
gctcaggatgcgcatgaagctattcgtccgacctcgatcgagcgtgatccggagagcatg
aagccattcatgagccgtgatcagatgaggctgtacaagctgatttgggatcggtttatt
gcgagccagatggcgtccgcaatcctggatacgatgtctgtagatattgctgcaggccgg
gcaaccttccgggcaacgggatcgaaggttcggttcccgggcttcatgaaggtatatgtg
gaagggaatgatgacggtacgacagaagaagagaactttcttcctgctctgcagtccggt
gacaagctggaacatgacagcattgaaccgaagcagcattttacacagccaccgccaagg
tatagcgaggcacggctcgtccgcacgctggaggagctcggcattggcagaccaagcact
tacgcgccaacgctggaaacgattcagaagcgcggctatgtcgcaattgaagagaagaaa
tttatgcctaccgagctcggtgaattggtcatcgagcagatggagcaatttttcccggag
attctgaacgtagagtttacagccaatatggaagaggacctcgaccatgtagaagaaggc
gcggaggattgggtaaaggttcttggagagttctacaagtcctttgagaaacgtcttacg
gtagctgaggaagagatgaaagagattgagattgaagatgaggtctctgatgaaatctgc
gagaagtgcggcaagccgctagtgtacaagcttggcagattcggcaagtttctggcctgc
tccgggtttccagattgccggaatacgaagccgatcattaaggacattggagtaacctgc
ccgagctgtaaggaaggccatgtcgtggaacggcgcagtaagaaaggccgggtgttttat
ggctgtgacagatatccggaatgtgaatacgtttcgtgggataaaccgtcactgaagccc
tgcccgaattgcagcagcctgatgacggagaagaagacgagacaaggaattaagctgcaa
tgtacgtcctgcgatcattctgaaatgatggaagagccggaggacggttcagatttttaa
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