Paenibacillus algicola: E6C60_2866
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Entry
E6C60_2866 CDS
T07807
Name
(GenBank) putative DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
palo
Paenibacillus algicola
Pathway
palo03030
DNA replication
palo03430
Mismatch repair
palo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E6C60_2866
03430 Mismatch repair
E6C60_2866
03440 Homologous recombination
E6C60_2866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palo03032
]
E6C60_2866
03400 DNA repair and recombination proteins [BR:
palo03400
]
E6C60_2866
Enzymes [BR:
palo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E6C60_2866
DNA replication proteins [BR:
palo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E6C60_2866
DNA repair and recombination proteins [BR:
palo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E6C60_2866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
HROB
DUF6282
DUF655
Motif
Other DBs
NCBI-ProteinID:
QCT03577
UniProt:
A0A4P8XLB8
LinkDB
All DBs
Position
complement(3019656..3023267)
Genome browser
AA seq
1203 aa
AA seq
DB search
MSSFVHLHVHSEYSLLDGAAKLTELVQQAAELGMKSLALTDHGVMYGAVPFYKLCKQHGI
KPIIGCEAYITEGSRKDRGSRKDQPIYHLILLAKNETGYRNLMKLCSIGHLEGFHYKPRI
DMEALAEFNEGIICLSACLGGEVPQLLLHGRTDAAREAALRYKEIFGPDYYLELQDHGLP
EQKRVNPQLIQLSQELDIPLVLTNDVHYLAPEDAEVQDVLICIGTGTNVEDDSRLRIPTR
QLYLKSAEEMGRLFPHAMEAAANTVAIAEQCSLELTFGQSILPEYRPLPEGMDAAAYLGQ
LCLEGLELRYRGSERWQDEAMREELHRRLHYELGVIENMGFSHYFLIVWDFIAYAHRQGI
AVGPGRGSSAGSLVAYTLQITNVDPMKYHLLFERFLNPERVSMPDIDIDFSDERRDEVID
YVVDKYGRQHVAQIITFGTLAAKAAVRDVGRALNVPFGDVDRTAKLIPNQLGIRIARAVE
DSPGLKEQYDSKPKVKQLLDMAMKVEGMPRHASTHAAGVVISKEPLTETVPLQEGSEKTA
LTQYSMENLESIGLLKMDFLGLRTLSIIERSMRWIQETGLTPPDWSRIADDDPATYAMLG
RGDTTGVFQLESAGMRRVLKDLKPSGFEDIISVLALYRPGPMDFIPKYIQAKHGVIEPEY
PHPDLAEILGDTYGIIVYQEQIMQIASRMAGFSLGEADLLRRAVSKKKREVLDLERDHFV
TGSLNQGYSGDEANRVYDMIVRFADYGFPRAHAAAYGVLAFQTAYLKAHYPVHFMASMLT
AVMGSHRKVAEYVLECQRMGIKVLPPDVNESGSLFTPIAEADDAENGGSPGFIRFGLAAI
KNVGTQAVDSMVRLREDKPFESLLDFCRRIDLRVCNKRVIESLIQAGAFDSLPGHRSQQT
AMVDETVEAALKWRKEREDLQIQLFDFDVIETANWDIEYPDIPPYSASQQLELERELLGM
YLSGHPLDDYDELLQEAGTERLMDLDEAADESQVTVAGMVVAVKTITTKQGKAMAFVEFE
DQIDRCEVVLFPEVWRKSSPFIEKGALLALRAKVQQQDEGFKLLAEEAAPLERDRLQQLV
RRSRIGRKERSAVRPAVRPPESTRKQQVMPPGEEMKQSPGNGFKEQSAGQRVFIKISPDC
EDPQILSRLKKLLQQHRGPAATVLFYESNQKALALSEAYRIDPRDVLVASIEEMLGKGSV
KIK
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgagctctttcgtgcatctacacgtgcacagtgaatacagtctgctcgacggggctgca
aagctgacagagctcgttcagcaggcagctgagctgggcatgaaatcactcgcccttacc
gatcatggcgtgatgtatggcgctgtgccattttataaattatgcaagcagcacggaatc
aagccgattatcggctgtgaggcttatattacggaaggctcccggaaggaccggggaagc
cgcaaggatcagccgatctaccatttaatactgctggcgaagaacgagaccggctatcgc
aatctgatgaagctgtgctccatcggccatttagagggctttcattataagccccggatt
gatatggaggccctggcggaatttaatgaaggcattatatgcctgagtgcgtgcctgggc
ggcgaagtgccgcagctgctgctgcatggacgtaccgatgccgcgcgggaggcggcttta
aggtataaggagatctttggacctgactattatctggagctgcaggaccatggcctgccg
gagcagaagcgtgtcaatcctcagctgattcagttatcgcaggagctggacattccgctc
gtgttaacgaatgatgttcactatttggcgccggaggatgccgaggtccaggatgtattg
atctgcatcggcacaggcacgaacgtggaggatgacagccggctgagaattccgacccgg
cagctatacttgaagagtgctgaggagatgggtcgtctgtttccccatgccatggaagcg
gcggctaataccgtcgccattgcggagcagtgctcgctggagttgaccttcgggcagtcc
attctgccggagtaccggccgctcccggaaggcatggacgctgccgcttatctaggccag
ctgtgccttgaagggcttgagctgcgttatcgcggcagtgaacggtggcaggatgaggcc
atgcgggaggagcttcatcgtcggcttcattatgagctgggcgtcattgagaacatgggc
tttagccattatttcttgattgtgtgggatttcattgcatatgcccatcggcagggcatt
gctgttggaccgggcaggggctcttctgcaggaagcctggtagcgtacaccttgcagatt
acgaatgtggacccgatgaaatatcatttgctcttcgagcgctttctgaatccggagcgg
gtgagtatgccggatatcgacattgactttagtgacgagcggcgcgatgaagtcatcgac
tatgtggttgataaatacggacgacagcacgtggctcagattattaccttcggtacgctt
gcagctaaggccgccgtgcgtgatgtcggccgcgcattgaacgtgccctttggagatgta
gaccgcacggccaagctgattccgaatcagcttggcatccgcattgcccgggctgtcgag
gacagtcccggcctgaaggagcagtacgacagcaagccgaaggtgaagcagctgctggat
atggcaatgaaggtggagggcatgccccggcacgcgtcgacgcatgccgcaggcgtggtc
atttccaaggaaccgctgaccgagacggtcccgcttcaggaaggcagcgagaagacggct
ttgacgcaatattcgatggagaatctggaaagcatcggcttgctgaaaatggactttctg
gggcttcgaaccctgtccattatcgagcgtagtatgagatggattcaggaaacggggctg
acgccgccggactggagcaggattgctgatgacgatcccgctacctatgccatgctgggc
cgaggcgatacgacgggggtattccagctggagtcggcagggatgcggagagtgctgaag
gatctgaagccaagtggatttgaagacattatttccgtgctggcgctgtaccgtccgggg
ccgatggattttattccgaagtacattcaggccaagcacggcgtcatcgagccggagtac
ccgcatccggacctggccgaaatattaggcgacacctacggcattattgtctatcaggag
cagatcatgcagatcgcgtcccggatggcagggttctcgctgggagaagcagatcttctg
agacgagcggtctccaagaagaagcgcgaggtgctggatctggaacgggatcatttcgtg
accggcagcttgaaccagggctattccggggatgaagcgaatcgggtgtacgatatgatc
gttcgctttgcggattacggcttcccgcgggcgcatgccgcggcatatggtgtccttgcc
ttccagacggcgtatctaaaggcccactatcccgttcattttatggcatccatgctcacc
gcggtcatgggcagccaccgaaaggtggcggaatatgtgctggaatgccagcgcatgggc
atcaaggtgcttccccctgacgtgaatgaaagcgggagcctgttcaccccgatagcggag
gctgatgatgcagagaatggcgggtctcccggatttattcgcttcgggcttgccgcaatc
aagaatgtcgggacccaggctgtggacagcatggtccgtcttcgtgaagacaagcccttt
gaaagcctgctggatttctgccgccggatcgacctgcgggtctgcaataagcgggtgatc
gagtcgcttattcaggccggtgcctttgactctctgccagggcaccgctcgcagcagacc
gccatggtggatgaaaccgtggaggccgcgctgaaatggcggaaggagcgagaggatctg
caaattcagctcttcgacttcgatgtgattgaaacggcgaattgggatattgaatatccg
gatattccgccgtattccgccagccagcagctggagctggagcgggagctgctcggcatg
tatctctccggccatcctctggatgattatgacgagctgctgcaagaggccggaaccgag
cggctgatggacttggacgaggctgccgatgagtcccaggttacggtggcgggtatggtg
gtcgcggtcaagacgattaccaccaagcagggcaaggcgatggcctttgtagaatttgag
gaccagattgaccgctgcgaggtggtgctctttccggaggtctggagaaagagcagcccc
ttcattgagaaaggtgcactgctggccctgcgagccaaggtccagcagcaggacgagggc
ttcaagctgcttgccgaggaggcagcgccgcttgaacgggaccggctgcagcagcttgta
aggcgatcccgaatcgggcgcaaggagcggtccgctgtgagaccggctgtcaggccgccg
gaatccactcggaagcagcaggtgatgccgcctggggaagaaatgaagcaatcacccggg
aacggcttcaaggagcagagcgcaggtcagcgggtatttatcaaaatatctccggactgc
gaggaccctcaaattctgtcgaggctcaagaagctgctgcagcagcaccgggggccagcg
gcgacagtgctattctatgaaagcaatcagaaggcgctggccctcagcgaggcctaccgg
attgatcccagggacgtattggtagcctcgatcgaggaaatgctgggtaaaggcagcgta
aaaatcaaatag
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integrated database retrieval system
