Paenibacillus algicola: E6C60_3540
Help
Entry
E6C60_3540 CDS
T07807
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily protein
KO
K03090
RNA polymerase sigma-B factor
Organism
palo
Paenibacillus algicola
Brite
KEGG Orthology (KO) [BR:
palo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palo03021
]
E6C60_3540
Transcription machinery [BR:
palo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E6C60_3540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Sigma70_r2
HTH_23
Sigma70_ECF
HTH_50
HTH_Tnp_ISL3
GerE
HTH_38
HTH_28
KORA
HTH_24
TnsD
HTH_29
MarR
HTH_31
MarR_2
HTH_10
HTH_3
Phage_antitermQ
DUF1492
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
QCT04250
UniProt:
A0A4P8XQV6
LinkDB
All DBs
Position
complement(3697686..3698456)
Genome browser
AA seq
256 aa
AA seq
DB search
MSDKVTPPESKDEAIGLIWEYQQTKDNDIATVLIQKYEPMVRMAAGKIARNRPDLYEDLY
QVGQMALIRLLQQYDISLGIPFEPYAMKSMIGHMKNFLRDKSWYIQVPRRIKEKGALVQQ
AIDELMVKLERSPDVHEIAEHLGLTVEETVEVLAGRECYHYVSLDSPLSQEETGATLGEL
ISSDVNDFDSVEKRMDLQQALSQLKEQEQKVLLLAFQEGQSQRAIAQKLGVSQMSVSRIQ
KRATEKLKQIMSNSSY
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataaagtgactcccccagagtccaaggatgaggcaattggcctgatttgggaa
taccagcagaccaaggataacgatattgccaccgtccttattcaaaaatatgagccgatg
gttcgcatggcagccggcaagattgccagaaatcgacctgatctctacgaagacttgtat
caggtgggtcagatggcgctcatccggctgcttcagcaatacgatatcagcctgggtatt
ccgtttgagccctacgcgatgaagagcatgatcggccacatgaagaacttccttcgagat
aaatcctggtacatacaggtgcctcgccggatcaaggagaagggtgccttggtgcagcag
gccatcgacgagctgatggtcaagctggagcgttcgccggatgtgcatgagatcgccgag
catttgggccttacggtggaggaaacagtagaggtgcttgccggtcgggagtgctatcac
tatgtatccctggattctccgctctctcaagaggaaacgggtgcgacgcttggtgagctc
attagctccgatgtcaatgattttgactctgtcgagaagcgtatggatctgcagcaggct
ctcagccagctgaaggagcaggagcagaaggtattgctgctcgccttccaagagggtcag
tcacagcgggcaattgcccagaagctgggcgtttcgcaaatgagtgtatcccgtatccag
aaacgcgctacagagaagttgaagcagattatgtccaattcttcttactga
DBGET
integrated database retrieval system
