KEGG   Paenibacillus algicola: E6C60_3589
Entry
E6C60_3589        CDS       T07807                                 
Name
(GenBank) beta-lactamase domain protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
palo  Paenibacillus algicola
Pathway
palo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:palo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    E6C60_3589
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:palo03019]
    E6C60_3589
Messenger RNA biogenesis [BR:palo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     E6C60_3589
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: QCT04299
UniProt: A0A4P8XU45
LinkDB
Position
3749175..3750773
AA seq 532 aa
MYAVEFRNEIVIIDAGLKFPDAEMSGVDYIIPDIRYLIENKSKIKGLFLTHGHEDHIGAI
PYVLRQIQMPIYGGPLTIGLVRAKLEEHRLLDQSDLRVFHENDKYSFKHLAVHFFRTTHS
IPDAFGVVIETPYGPIVHTGDFKFDFTPEDKPADIHKIMSLGRRGVLALLADSTNSEREG
FTPSERTVGLSILKQFQESPGRILFATFASNVHRLQQVVEAAIQTNRKLAIVGRSMEKVF
TIGQELGYIRIPDGMLIDVKTVNRYRDHQVAIICTGSQGEPNAALTRIASGSHRSIQIHP
DDTVIFSSSPIPGNTQNVNRSIDLLMRAGAEVRYGSILDIHTSGHGCREDLKLMLSSLRP
KYFVPIHGEYRMLLNHRQLAKDVGVPENHVYLLNIGNTLSLFRNGARKGRNIPSGDVYIN
NGELRTHEKELLEERVQLAHDGVVIAAMTLNRETRKLIAGPELITRGFVYMQDSKPLLRR
AEAMLRKHLNKAGEQREYDESAWEQMTTSTLNRYFKRELGRSPYIMPSIMEI
NT seq 1599 nt   +upstreamnt  +downstreamnt
atgtatgcggtcgaattccgcaatgaaatcgtgatcattgatgccggattgaagttcccg
gatgctgaaatgagcggagtcgattacattattcccgatatccgctatctgattgagaat
aagagcaagatcaagggcctgttcctgactcatggacatgaagaccatatcggagctatt
ccttatgtactgcgccagattcagatgcctatttatggaggaccgctgacgatcggtctc
gttcgcgcgaagctcgaagagcaccgcctgctggatcaaagcgatctgcgggtgtttcat
gagaatgataaatacagcttcaagcacctcgccgtgcatttcttccgtacgacacacagt
attccggatgcattcggcgtcgtcattgaaactccatacggacctattgtccataccgga
gacttcaagttcgactttactccagaggacaagccggccgacattcataagattatgagc
cttggccgccgaggggtgcttgcgcttctcgcggacagcacaaacagtgagcgtgagggc
ttcactccttccgaacgaaccgtagggctgtccatcctgaagcagttccaggaaagcccc
ggccgaattctgttcgcgaccttcgcctccaatgtccaccgtctgcagcaggtcgtagag
gccgctatacagacgaaccgaaagctcgccatcgtgggacgaagcatggagaaggtgttt
acgatcggccaggagctgggctatatccgaatcccggacggcatgctgattgatgtgaaa
acggtcaaccgttaccgtgaccatcaggtcgcgattatttgtacaggcagccagggcgag
cccaacgcggctctcacccgaattgcttcaggatcacaccgctcgattcagattcatccc
gatgatacggtaatcttctcctcctcgccgattccggggaatacgcaaaatgtgaaccgg
agcatcgatctgctcatgcgcgctggcgctgaagtaagatatggctcgattctggacatc
cacacgtccggccacggttgccgcgaggatctcaagctgatgctcagcagcctgcgtccg
aaatatttcgtgccgattcacggagaataccggatgctgctcaatcatcgtcagctggcg
aaggatgtgggcgttcccgagaatcatgtttacttgctgaacatcggcaacaccctttcc
ttgttccgcaacggggctcgtaaaggccgtaacatcccatccggagatgtctatattaac
aacggagagcttcgcacgcacgagaaggagctgctggaggagcgcgtgcagcttgctcac
gacggtgtcgtcattgctgccatgaccctgaaccgtgaaacgcggaagctcattgccggt
cccgagctgatcacccgcggattcgtttacatgcaggactcgaagccgctgctgcgccgg
gctgaagccatgctgcgcaagcatcttaacaaggctggagagcagcgggagtacgatgag
tctgcatgggagcagatgacaacatcgaccctcaatcgttatttcaagcgcgagcttgga
cggagcccttacatcatgccttccattatggagatctaa

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