Paenibacillus algicola: E6C60_3742
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Entry
E6C60_3742 CDS
T07807
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
palo
Paenibacillus algicola
Pathway
palo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
palo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E6C60_3742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palo03021
]
E6C60_3742
03400 DNA repair and recombination proteins [BR:
palo03400
]
E6C60_3742
Enzymes [BR:
palo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E6C60_3742
Transcription machinery [BR:
palo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E6C60_3742
DNA repair and recombination proteins [BR:
palo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E6C60_3742
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
QCT04449
UniProt:
A0A4P8XUG1
LinkDB
All DBs
Position
complement(3947493..3951038)
Genome browser
AA seq
1181 aa
AA seq
DB search
MAGHLVQYGRRTRRSYARINEVLEVPNLIEIQQKSYEWFLEEGLREMFQDISPIQDFTGN
LVLEFIDYSLGEPKYTVDDAKERDVTYAAPLRVKVRLINKETGEVKEQEVFMGDFPLMTE
TGTFIINGAERVIVSQLVRSPSVYFSTKVDKNGKKTYTATVIPNRGAWLELETDAKDIVY
VRIDRTRKIPVTVLLRALGFGTDAEILDLLGNDEYIRNTLDKDNTDSTEKALIEIYERLR
PGEPPTLENAKSLLVARFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAESLVDTETGE
IIAEAGQTVDRRLLDEIIPYLENNVGFKTYHVAGGVMESDDIPLQTIDVFSPFEDGKVVK
VIANGIIDKSVKHITQADIISSISYFINLLHGIGDTDDIDHLGNRRLRSVGELLQNQFRI
GLSRMERVVRERMSIQDASVITPQALINIRPVIASIKEFFGSSQLSQFMDQTNPLAELTH
KRRLSALGPGGLTRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLINSLSTFARINEYGF
IEAPYRWVDPKTGQVTTQIDYLTADEEDNYVVAQANAELTEESKFRDDMVIVRYNKQSDN
ILPMPSERVDYMDVSPKQVVSVATALIPFLENDDSNRALMGSNMQRQAVPLLIPKAPLVG
TGMEHKSAKDSGVCIVSKYDGIIERSSANEIWLRRVESVDGQEVKGDIVKYKLHKFMRSN
QGTCINQRPIVQRGDVIQKGDILADGPSTEMGELALGRNVVVAFMTWEGYNYEDAILLSE
KLVKEDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEEALKNLDERGIIRIGAEISAG
DILVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGSDGIIVDVKVFTRENGD
ELPPGVNQLVRVYIAQKRKISEGDKMAGRHGNKGVVARILPEEDMPFLPDGTPVQVVLNP
LGVPSRMNIGQVLEVHLGMAALQLGIHVATPVFDGASEYDVFDTMEEAGMQRNGKTVLYD
GRTGERFEREVTVGVMHMIKLAHMVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEME
VWALEAYGAAYTLQEILTVKSDDVVGRVKTYESIVKGENVPEPGVPESFKVLIKELQSLG
MDVKILSEDEQEIEMKELDDEDEGGNDKLSLNLEGAEVGVE
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggacatcttgttcaatatggtcgacgcactcggcgaagttatgcacgtattaac
gaggtactcgaagttccgaacctgattgagatccaacaaaaatcctacgaatggtttttg
gaggaaggacttcgcgaaatgtttcaggacatctcgccaattcaggactttacaggaaac
ttggtgctggagtttattgactacagcctcggagaaccgaaatataccgtcgatgacgcg
aaagaacgcgacgttacttatgcggcgccgctccgcgtaaaggttcgtctcatcaacaag
gagacaggagaagtcaaggagcaggaagtgttcatgggagatttcccgctgatgacggaa
accggaacattcatcattaacggtgccgaacgggtcattgtcagccagttggttcgctct
cccagcgtctatttcagcactaaagtggacaaaaacggaaagaaaacatacactgctacc
gttattccgaaccgtggtgcctggctggagcttgaaacggatgcgaaggacatcgtttat
gtccggatcgaccgtacacgcaaaattccagtgacggtgctgcttcgcgctctgggtttt
ggcacggatgccgaaattctggacctgctcggcaatgacgagtacattcgcaataccctg
gataaagataatacagattctacagagaaggcgctcattgagatctatgaacgtctccgt
ccaggcgaaccgccgacgctggagaatgcaaagagcctgctcgtcgcacgtttcttcgat
ccgaagcgttatgacctggcgaatgtaggccgctataagattaacaagaagctccatatc
aagaaccggctgtttaaccagcgtttggctgaaagtctggttgatacagagacgggtgaa
attatcgctgaagcgggtcaaaccgtggatcgccgtctgctggatgaaatcattccgtac
ctggagaacaatgtaggcttcaaaacctatcatgttgccggtggcgttatggaaagcgat
gatattccgcttcagactattgatgtgttctctccgtttgaggacggcaaggtcgttaag
gttattgcgaacggaattatcgacaaatccgtaaagcacattactcaagcggacatcatt
tcttcgatcagctatttcattaacctgctgcatggcatcggcgatacggatgatattgac
catctgggcaaccgtcgtcttcgttctgtgggtgagctgctgcagaatcaattccgtatc
ggtttatcccgtatggagcgcgtagtacgggagagaatgtccattcaggacgctagtgtg
attacgcctcaggcgctgatcaacattcgcccggttatcgcatcgattaaggaattcttc
ggaagctctcagctgtcacagtttatggaccagacgaatccgctggcagagctgacgcat
aagcgtcgtctgtctgcactcggaccgggcggtttgactcgggaacgtgccggctttgaa
gtgcgggacgtccatcacagtcactacggccggatgtgtccgattgaaacaccggaggga
ccgaacattggtctgatcaactccctttcgacctttgcccgcattaacgagtacggcttt
attgaagcgccgtatcgctgggtagatccgaagaccggacaagtgaccacgcagattgat
tacttgaccgcggacgaagaggataactatgtggtggcccaggctaatgcggaattgaca
gaagagagcaagtttagggacgatatggttattgtccgttacaataagcagtcggataac
attttgccaatgccaagtgaacgtgtagactacatggacgtttcaccgaagcaggttgta
tctgttgcgaccgcgcttattccgttcctggagaacgatgactccaaccgcgcactgatg
ggatcgaacatgcagcgtcaggctgtacctctgttgattcctaaagctccgctggttgga
acgggaatggaacataaatccgcgaaggattccggtgtatgtattgtatccaaatacgat
ggaattattgagcgttcgtctgcgaacgagatctggctgcgccgagttgaatcggtagac
ggtcaagaggtcaaaggcgatatcgttaagtataaattacacaaatttatgcgttcgaac
caaggtacctgcattaaccagcgcccgatcgtacaacgcggtgatgtgatccagaagggt
gacatcctggcggacggtccatccacggagatgggtgaactggcactgggacgtaacgta
gtcgttgctttcatgacctgggaaggctacaactatgaggatgcaatcctgctctccgag
aaactcgtgaaagaggatgtttacacatccattcatattgaagaatatgagtctgaagca
cgggatacgaagctcggtccggaagagatcacacgggatattccgaacgtcggggaagaa
gcactgaagaacctggatgagcgcggtattattcgcatcggagcagaaatcagcgcgggc
gacattctcgttggtaaagtaacgcctaagggtgttactgagctgacagcagaggaacgc
ctcctgcacgcaatctttggtgagaaggctcgtgaagtccgtgatacctcgctccgcgta
ccgcatggtagtgacgggattatcgtggatgttaaggtgtttactcgcgagaacggcgat
gagctgcctccgggcgtgaatcagctggtgcgcgtgtatattgctcagaagcggaagatc
tcggaaggcgataagatggccggacgccatggtaacaagggtgtcgtggcgcggattttg
ccggaagaggatatgcctttccttccagacggcacgccggtacaggttgttcttaacccg
ctgggggtaccttcccggatgaacatcggacaggtgctggaggttcacttgggtatggct
gcgctgcagctgggaatccatgtcgcgaccccggtatttgacggtgccagcgagtacgac
gtgtttgatacgatggaagaagcaggcatgcagcgcaatggtaagaccgtgctgtatgac
ggacgtacgggagagcgctttgagcgcgaggttaccgttggcgtcatgcacatgatcaag
ctcgcgcacatggttgacgataagattcacgcccgttccacgggtccttactctctcgtt
acacagcagccgctgggtggtaaagctcagttcggcggtcagcgtttcggggagatggag
gtatgggcactggaagcctatggtgctgcatatacccttcaggaaatcctcaccgtcaag
tccgatgatgtggttggtcgtgtgaagacttacgagtctatcgtcaagggcgagaatgta
ccggagccaggagttccggagtcgttcaaagtattgatcaaggagcttcagtccctcggt
atggatgtcaaaatcctgagcgaggacgagcaggagatcgaaatgaaagagctggacgac
gaggatgagggcggcaacgataagctgagcctcaacctggaaggtgcggaagtcggagta
gaataa
DBGET
integrated database retrieval system
