Paenibacillus algicola: E6C60_3779
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Entry
E6C60_3779 CDS
T07807
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
palo
Paenibacillus algicola
Pathway
palo03420
Nucleotide excision repair
palo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
palo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E6C60_3779
03430 Mismatch repair
E6C60_3779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palo03400
]
E6C60_3779
Enzymes [BR:
palo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E6C60_3779
DNA repair and recombination proteins [BR:
palo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E6C60_3779
MMR (mismatch excision repair)
Other MMR factors
E6C60_3779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_11
Viral_helicase1
AAA_30
ResIII
DUF2067
Terminase_6N
DEAD
Motif
Other DBs
NCBI-ProteinID:
QCT04484
UniProt:
A0A4V1G4F2
LinkDB
All DBs
Position
complement(3988858..3991188)
Genome browser
AA seq
776 aa
AA seq
DB search
MQPIDIHEAISRLNPPQRQAVESTDGPLLIMAGAGSGKTRVLTHRIAYLIATRKAPPWSI
LAITFTNKAAREMQERVSRLVGNEGRDIWVSTFHSMCVRILRKDIERIGYTSNFSILDST
DQLSVIRSCMKQLNIDPKKFEPKAIQAMMSTAKNELITPQQYEQKAADYLESMTAKVYKE
YQKRLKSNNSLDFDDLIMSTIQLFKEVPEVLDFYQRKFKYIHVDEYQDTNRAQYMLCRML
ADSHHRICVVGDSDQSIYRWRGADISNILNFEEDYPEARTIMLEQNYRSTSNILSAANSV
IGLNSGRKPKNLWTDQGEGSKIKVFRGDTEHDEGYFVTSEINKNVKNGQNYQDHAILYRT
NAQSRVIEEILIKSDIPYQIVGGIKFYDRKEIKDMLAYLRLISNPDDDVSLTRIINVPKR
SIGDTTVGKLAAAATERGVSMYRALEVVDDLGFAGRTRNALVEFYDMIASLHRMVEFLSV
TELSEKMLELSGYRSELKNENTIESRSRLENIDEFLSVTQEFEKNNEDKSLVSFLTDLAL
IADIDSMNNDGEEDRSDAVVLMTMHSAKGLEFPVVFIIGMEEGVFPHSRALMDNEELEEE
RRLAYVGITRAEQQLFLSCARMRTLFGRTTANPASRFLDEIPDELKEDTHIARDRYRRGA
GAGGSYAGRGFSGSGGGNFGADRTRDLSLGGSTASAVPSPSSRVTVTNGPVSRTAAGASS
AGAFQAGDKVAHGKWGTGTIVSVKGSGNDTELQIAFPAPVGVKRLLAGFAPITKVE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgattgacatacacgaggccattagccgcctcaatcccccgcagcgccaggcg
gttgaatctaccgatggaccgctgctgattatggcgggtgcaggctcgggcaagacgcga
gttctgacgcaccgtattgcgtatctgattgctacgcgcaaggcaccgccatggagtatt
ttggcgatcacgtttacgaacaaagcagctcgggaaatgcaggagcgggtatcccgattg
gtcgggaatgaaggaagagatatttgggtatccaccttccactccatgtgcgtgcgcatt
ctgcgcaaggacattgagcggatcggctatacgtccaacttcagcattctggactctaca
gaccagctttcggtcattcgcagctgtatgaagcagctgaatatcgatcccaagaagttt
gagccgaaggccattcaggccatgatgagcaccgccaagaatgagctgatcacgccgcag
cagtacgagcagaaggctgcggattatctggagagcatgaccgccaaggtgtataaagaa
taccagaagcgcctcaagagcaataactcgctcgattttgatgacctgatcatgtctacc
attcagctgtttaaggaagtgccggaggtgctggatttctaccagcgtaaattcaaatat
attcatgtggacgaataccaggatacgaaccgggcgcagtacatgctgtgccggatgctg
gctgacagccatcaccggatctgcgtggtgggggacagtgaccagtcgatttaccggtgg
cgcggcgcggatatcagcaacattctgaattttgaagaggactatccggaggcccgcacc
attatgctggagcagaactaccggtctacgtcgaacatcctgagcgcggcgaacagcgtc
atcgggcttaactccgggcgcaagccgaagaatctgtggacggatcagggcgaaggctca
aagatcaaggtgttccgcggggatacagagcatgatgagggctattttgtcacgtcagaa
atcaataaaaatgtgaaaaacggccaaaactatcaagatcacgccatcttgtaccgtaca
aacgcccagtcccgggtgatcgaggaaattctgattaaatcggacattccgtatcagatt
gtcggcggcatcaagttctacgatcgaaaagagatcaaggacatgcttgcctacctgcgg
ctcatctcgaacccggacgatgacgtcagtctgacgcggattattaacgtgccgaagcga
agcatcggggatacgacggtaggcaagctggcggcagcagcgacggagcggggcgtctcc
atgtatcgggcactggaggttgtggatgatctcggctttgcggggcgtacccggaacgcg
ctggtggaattctacgatatgattgcttctctgcaccggatggtggagtttctgtcggtg
accgagctgagtgagaaaatgctggagctgtccggctaccgcagcgagctgaagaatgag
aacacgattgaatcccgctcacgcctggagaacatcgacgagtttctgtcggtaacccag
gagtttgagaagaacaatgaggacaagtcgctcgtctccttcctcaccgatcttgcactc
attgcagatattgactccatgaacaatgatggcgaggaggaccgcagtgatgctgttgtc
ctgatgacgatgcacagtgcgaagggactggagttcccggtggtatttatcattggtatg
gaggagggagtattcccgcacagccgcgccctgatggataatgaggagctggaggaagag
cgccggctggcttatgtcggaattacccgggcggagcagcagctattcctgtcctgtgcg
cggatgcgcactctgttcgggcggacgacagcgaacccggcttcccgctttctggacgag
attccggacgagctgaaggaggatacgcacatcgcccgtgaccgttaccgccggggtgct
ggggctggcggctcttatgcgggccgcggctttagcggcagcgggggcggcaacttcggg
gcagaccgcacaagagatctgtctcttggcggctcgaccgcctccgccgtaccttctccc
agcagccgcgttaccgtaacgaacggaccggtatcccgcacggcagccggcgccagcagc
gccggggccttccaggccggtgacaaggtggcccatggcaagtggggcaccggcaccatt
gtgtccgtgaagggcagcggcaatgatacggagcttcagattgcgtttccagcgccggtt
ggcgtcaagcgcctgctcgccggctttgcgcccatcaccaaggtggagtag
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integrated database retrieval system
