Paracoccus alcaliphilus: JHW40_00045
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Entry
JHW40_00045 CDS
T08960
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
palp
Paracoccus alcaliphilus
Brite
KEGG Orthology (KO) [BR:
palp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palp03032
]
JHW40_00045
03036 Chromosome and associated proteins [BR:
palp03036
]
JHW40_00045
03400 DNA repair and recombination proteins [BR:
palp03400
]
JHW40_00045
DNA replication proteins [BR:
palp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JHW40_00045
Chromosome and associated proteins [BR:
palp03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
JHW40_00045
DNA repair and recombination proteins [BR:
palp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
JHW40_00045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Poly_export
Motif
Other DBs
NCBI-ProteinID:
WCR18204
LinkDB
All DBs
Position
complement(9518..9817)
Genome browser
AA seq
99 aa
AA seq
DB search
MATASAKPMTKTQLVATLAEEMGSDKKSASAALDAIAAVITREVANGGSVTLPGIGKIAC
RARPERQVRNPQTQEMMTKPADRQVKVTVAKALKDSVNS
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggctacggcttccgccaaaccgatgaccaagacccagcttgtcgccacgctggcagaa
gaaatgggttcggacaagaaatcggcatccgcggctctggatgcgatcgccgccgttatc
acccgcgaagtcgccaatggcggctcggtgacgctgcccggtattggcaagatcgcttgt
cgcgcccgtcccgagcgtcaggtgcgcaatccgcagacccaggaaatgatgaccaaaccc
gccgaccggcaggtgaaggtgaccgttgccaaggccctgaaagacagcgtcaacagctga
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