Paracoccus alcaliphilus: JHW40_00365
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Entry
JHW40_00365 CDS
T08960
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
palp
Paracoccus alcaliphilus
Pathway
palp00521
Streptomycin biosynthesis
palp00523
Polyketide sugar unit biosynthesis
palp00525
Acarbose and validamycin biosynthesis
palp00541
Biosynthesis of various nucleotide sugars
palp01055
Biosynthesis of vancomycin group antibiotics
palp01100
Metabolic pathways
palp01110
Biosynthesis of secondary metabolites
palp01250
Biosynthesis of nucleotide sugars
Module
palp_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
palp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JHW40_00365 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JHW40_00365 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
JHW40_00365 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JHW40_00365 (rfbB)
00525 Acarbose and validamycin biosynthesis
JHW40_00365 (rfbB)
Enzymes [BR:
palp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
JHW40_00365 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Sacchrp_dh_NADP
adh_short_C2
NmrA
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
WCR18267
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All DBs
Position
complement(72125..73162)
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AA seq
345 aa
AA seq
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MKILVTGGAGFIGSAVVRLAVGRGHEVVNLDALTYAANLANVASVADNPLYRFEQVDIRD
RSALDRVFATHRPDAVMHLAAESHVDRSIDGPAAFIETNVIGTFNMLEAARDWWTGEGRP
EGFRFHHISTDEVFGSLGETGQFTETTPYDPRSPYSASKAGSDHLARAWHETYGLPVVLT
NCSNNYGPFHFPEKLVPVVILKALAGDPIPVYGDGGNVRDWLYVEDHADALLLVVEKGRI
GRSYNIGGENEATNLDLVRMICAHMDELHSEGAPHDRLIGFVADRPGHDRRYAIDPSRIR
DELGWRPSVTVEQGLRRTVEWYLDNRDWWQPLLSREGVGQRLGTG
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctggtgacgggcggcgcgggtttcatcggttcggccgtggtgcggctggcg
gtcgggcgtgggcatgaggtggtgaatctcgatgcgctgacctatgccgccaatctggcc
aatgtcgccagcgtggccgacaacccgctctatcggttcgagcaggtggatatccgtgat
cgctccgcgctggaccgggtctttgccacccaccggcctgatgccgtgatgcatctggcg
gcggaaagccatgtggaccgctctatcgacgggcccgcggcctttatcgagaccaatgtc
atcggcaccttcaacatgctggaggccgcgcgcgactggtggaccggcgaaggccgcccc
gaagggttccggttccaccatatctcgaccgacgaggttttcggatcgctgggtgagacc
ggtcagttcaccgaaaccaccccctatgatccgcgcagcccctattcggccagcaaggcg
ggatctgaccatctggcgcgagcctggcatgagacctatggcctgccggtcgtgctgacc
aactgttccaacaattacggcccctttcatttccccgaaaagctggtgccggtggtgatt
ctgaaggcgctggcgggcgatccgatcccggtttacggcgatggcggcaatgtccgcgac
tggctgtatgtcgaggatcacgccgatgcgctgctgctggtcgtcgaaaagggccggatc
gggcgcagctacaatatcgggggcgagaacgaggccacgaatctggatctggtgcggatg
atctgcgcccatatggacgaattgcactccgaaggcgcgccgcatgaccggctgatcggc
tttgtggcggaccgtcccggccatgaccggcgctatgccatcgacccaagccgcatccgc
gatgaactgggctggcggccttcggtcacggtcgagcaggggctgcgccgcaccgtcgaa
tggtatctggacaaccgcgactggtggcagccgctgctgtcacgcgagggtgtcggccag
cggctggggaccggctga
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