Paracoccus alcaliphilus: JHW40_01975
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Entry
JHW40_01975 CDS
T08960
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
palp
Paracoccus alcaliphilus
Pathway
palp03030
DNA replication
palp03430
Mismatch repair
palp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JHW40_01975
03430 Mismatch repair
JHW40_01975
03440 Homologous recombination
JHW40_01975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palp03032
]
JHW40_01975
03400 DNA repair and recombination proteins [BR:
palp03400
]
JHW40_01975
Enzymes [BR:
palp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JHW40_01975
DNA replication proteins [BR:
palp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JHW40_01975
DNA repair and recombination proteins [BR:
palp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JHW40_01975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
RNase_H_2
DEDDh_C
PAS_8
PAS
Motif
Other DBs
NCBI-ProteinID:
WCR18553
LinkDB
All DBs
Position
complement(366271..368253)
Genome browser
AA seq
660 aa
AA seq
DB search
MLTRLALRLRILLIFAGLAAAVLGFLVLALWVAGRRLTGQGADTGAMSGAVPDALVLDAL
VLAALIAGLGVLAVTAWVWFLFDRNVARPIEMLAGGLRTGQTSDPAEARYLADLGPAARD
AAEARARSAEALAGAISEHAADLEREKATLESILADIGAAAVMTDAGGRIVFYNASAAQL
LPGIALDRPIAGHLAGAALAAAEARLATGSGATDIRCLSLQGLPLWGRMRRVDGGTLLIL
RDRPARQPVPRDTLEALRRNAATLVPMLEALDGPIPPALARAIQAEGQGLANAVRELTAT
MTADAPVGRADLPELAAGLELAEGQRPLTLLVDADGLNGLLRHLDGRLRDMGITPRLVAD
TEGDDAEARLALTWTGAPVPMDRLESWLSQPPDPAQPDLTGHEILAAHATGIWPERDGGD
SKLVLPLQIAPAAGGGDPGLTYDFALSRREAASTRLADLTCVVFDTETTGLDPSDRIVQI
AGVRIARGRLTGERFETLVNPGCPIPASSTAVHGVTDAMVADAPDMTAALTAFRHFAEDT
VLVAHNAPFDMGFLRNAALDTGAHFDNRVLDTVLLSAMLWGQSAPHSLDALTERLGIVIP
EGDRHTAMGDTLATAEAYLRLIAALEAKGLERFEDILTEARRHRRLIEDANNRAAEARKS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgcggctggcgctgcggctgcggatcctgctgatctttgcgggactggcggcg
gcggtgctgggctttctggtgctggcgctgtgggtggccggccggcggctgaccgggcag
ggggccgataccggtgcgatgtcgggcgcggtgccggatgcgctggtgctggacgcgctg
gttctggcggcgctgatcgcgggtctgggggtgctggcggtcaccgcctgggtctggttc
ctgttcgaccgcaacgtcgcccgcccgatcgagatgctggcgggcgggctgcgcaccggc
cagacatccgaccccgccgaggcccgctatctggccgatcttggccccgccgcgcgcgat
gccgccgaggccagggcccgctcggccgaggcgctggccggggcgatctcggaacatgcc
gccgatctggaacgcgaaaaggcgacgctggaatccatcctggccgatatcggcgccgcg
gcggtgatgaccgatgccggggggcggatcgtgttctacaacgcctcggcggcgcagctg
ctgccggggatcgcgctggaccgcccgatcgcgggccatctggccggggcggcgctggcg
gcggcagaggcccgccttgccaccgggtccggggccaccgatatccgctgcctcagcctt
cagggcctgccgctgtgggggcggatgcgccgggtcgatggcggcacgctgctgatcctg
cgcgaccgccccgcgcgccagccggtcccgcgcgacacgctcgaggcgctgcgccgcaat
gccgcgacgctggtgccgatgctggaggcgctggacggcccgatcccgcccgcgctggcc
cgcgccattcaggccgaaggtcagggtctggccaatgccgtgcgggaactgaccgcgacg
atgaccgccgacgccccggtcgggcgggcggatctgccggaactggccgccgggctggaa
ctggccgagggccagcgcccgctgaccctgctggtcgatgccgacgggctgaacgggctg
ctgcggcatctggacgggcggctgcgcgacatgggcatcaccccgcgccttgtcgccgat
accgaaggcgacgacgccgaggcgcggctggcgctgacatggaccggcgcgccggtaccg
atggaccggttggaaagctggctgtcccagccccccgatcccgcgcagcccgacctgacc
ggccacgaaatccttgccgcccacgcaaccggcatctggcccgagcgtgacggcggggat
tcgaaactggtcctgccgctgcagatcgcccccgccgccggtggcggtgatcccggcctg
acctatgattttgcgctgtcgcggcgcgaggccgcctcgacccgactggccgacctgacc
tgcgtggtcttcgataccgagaccacgggcctcgatccctcggaccggatcgtgcagatc
gccggggtccgcatcgcccgtggccgcctgaccggagagcggttcgagacgctggtcaat
ccgggctgcccgatcccggcctcttcgaccgccgtgcatggcgtcaccgatgcgatggtc
gcggacgcccccgacatgaccgccgcactgaccgcctttcgccacttcgccgaggacacg
gtgctggtggcccataacgcgcccttcgacatgggcttcctgcgcaatgccgcgcttgat
accggggcccatttcgacaatcgcgtgctggacacggtgctgctgtcggcgatgctgtgg
gggcaatcggcgccgcattcgctggacgcgctgaccgagcgtctgggcatcgtcatcccc
gagggcgaccgccacaccgcgatgggcgacacgctggccaccgccgaggcctatctgcgg
ctgatcgccgcgctggaggccaagggactggaacggttcgaggatatcctgacagaagca
cgccgccaccgccgcctgatcgaagacgcaaacaaccgcgcagcagaagcaagaaaaagt
tga
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