Paracoccus alcaliphilus: JHW40_03820
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Entry
JHW40_03820 CDS
T08960
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
palp
Paracoccus alcaliphilus
Brite
KEGG Orthology (KO) [BR:
palp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palp03016
]
JHW40_03820 (truB)
Enzymes [BR:
palp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JHW40_03820 (truB)
Transfer RNA biogenesis [BR:
palp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JHW40_03820 (truB)
Prokaryotic type
JHW40_03820 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WCR18848
LinkDB
All DBs
Position
718417..719310
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AA seq
297 aa
AA seq
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MARKKGRDINGWLIVDKPAGITSTSVVNKVRWALEAKKAGHAGTLDPDATGVLAVALGEA
TKTVSYITDALKCYDFKVNWGAETTTDDASGQVMRDSATRPTADAIRAALPAFTGQIMQV
PPAFSAVKVDGERAYDLAREGEELELAARPLWVESLILLDSTPDQAKLEMVCGKGGYVRS
IARDLGRELGCLGHVAHLRRTWSGPFEADDAIPFDRIDREARDWLDTQLLPLESALDDMP
MLRATPDGARRIRNGNPGEVTGTAEWGEAVWVSDGEGPVCIGRYQGGTVQPERVFNL
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaagaagggccgcgacatcaatggctggctgatcgtcgacaagcccgcgggc
atcacctcgacctcggtcgtgaacaaggtccggtgggcgcttgaggcgaaaaaggccggc
catgccgggacgctggatcccgatgcaaccggcgttctggccgtggccctgggcgaggcg
accaagaccgtcagctatatcaccgacgcgctgaaatgctatgatttcaaggtgaactgg
ggcgccgagaccacgaccgacgatgcctcgggacaggtgatgcgcgacagcgccacccgc
cccacggcagacgccatccgcgccgcgctgcccgcattcaccggccagatcatgcaggtt
ccgcccgccttttcggcggtcaaggtcgatggcgaacgcgcctatgacctcgcgcgcgaa
ggcgaggaactggaactcgccgcccgcccgctctgggtcgaaagcctgatcttgctggac
agcacgccggatcaggcgaagctggaaatggtttgcggcaagggcggctatgtgcgctcg
atcgcgcgcgatctgggccgtgaactgggctgccttggccatgtcgctcatctgcgccgc
acatggtccggcccgttcgaggctgatgacgcaatccccttcgaccgtatcgaccgcgag
gcgcgggactggctggacactcagcttctgccactggaatccgcgcttgacgatatgccg
atgctgcgcgccacccccgacggcgcccgtcgcatccgcaacggcaacccgggcgaagtg
accggcaccgcagaatggggcgaggcggtctgggtcagcgacggcgaaggcccggtctgc
atcggccgctatcagggcggcacggtccagcccgagcgcgtcttcaacctttaa
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