Paracoccus alcaliphilus: JHW40_04420
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Entry
JHW40_04420 CDS
T08960
Name
(GenBank) hypothetical protein
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
palp
Paracoccus alcaliphilus
Pathway
palp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
palp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JHW40_04420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palp03400
]
JHW40_04420
Enzymes [BR:
palp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JHW40_04420
DNA repair and recombination proteins [BR:
palp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JHW40_04420
Prokaryotic type
JHW40_04420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WCR18957
LinkDB
All DBs
Position
838598..839278
Genome browser
AA seq
226 aa
AA seq
DB search
MFRAFRHIEPAQVRVFAIGQDPYPERDRATGRAFEDGAADLRGIASSLRRILQSGLTAMA
PARMADRDVRGWGAIRAQVGAHLNDRAAMTQYFDGLAEQGVLFLNAAWTFTEIEHHPDRA
ERKRRRARLQNAHRALWRPVTERVVGHLAAKNGAPVFLLFGGEALERFNSATRHLQEPPT
SVFCAHPTARRAAYFDYQNPLRRANRVRELQDLEAVQWWPHAAQDE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgttccgggcattccgccacatcgaaccagcgcaggtccgagttttcgctatcggacaa
gacccgtatccggaacgtgaccgcgccacgggccgcgccttcgaggacggcgcggccgac
cttcgcggcattgcgagcagcctgagacgaattctccagtcgggcctgacggcgatggca
ccggctcgcatggccgacagagatgttcgcggctggggcgcaattcgagctcaggtcgga
gcccacctaaacgaccgggcagcaatgacgcagtatttcgatggcttggcagagcaaggg
gtgttgttcctcaatgctgcctggacctttaccgagatcgaacatcatccagaccgagca
gaacgaaagcgccgacgcgcgcggctccagaatgcgcatcgggcgctgtggcgaccggtg
acggagagggtggttggtcacctggctgcgaagaacggagctccggtcttcctattgttc
ggaggagaagccttggagcgcttcaactccgcaacacggcatctgcaggagcctccaacc
agcgttttctgcgcccaccccactgcaaggagagcagcatacttcgactatcagaacccg
ctgagacgcgcgaaccgggtccgagaattacaggatctagaagccgtccaatggtggccc
cacgcggcacaggatgagtaa
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