Paracoccus alcaliphilus: JHW40_06115
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Entry
JHW40_06115 CDS
T08960
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
palp
Paracoccus alcaliphilus
Pathway
palp00300
Lysine biosynthesis
palp01100
Metabolic pathways
palp01120
Microbial metabolism in diverse environments
palp01230
Biosynthesis of amino acids
Module
palp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
palp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JHW40_06115 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
palp01002
]
JHW40_06115 (dapE)
Enzymes [BR:
palp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
JHW40_06115 (dapE)
Peptidases and inhibitors [BR:
palp01002
]
Metallo peptidases
Family M20
JHW40_06115 (dapE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
WCR19252
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Position
1188084..1189220
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AA seq
378 aa
AA seq
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MTDAARLTADLIRCPSVTPTEGGALVLLADLLTEAGFEVHRVDRNDTPNLFARWGARGAR
SFGFNGHTDVVPPGDPASWSHPPFGGHLHDGLIWGRGATDMKSGVAAFVAAAIDFVTETP
PDGAVILTITGDEEGPAGDGTVALLDWMVGQGERMDVCIVGEPSNPDRMGEMIKIGRRGS
ITFRVAARGVQGHAAYPHLARNPLHALTQFLHDLIATPLDQGSEHFDASGLQITSVDCGN
ASSNVIPETATAVINIRFNDLHSGDSLIRDLDARAQAISERTGVELTLSASISGESFLTR
PGPFVDLVREVVTAETGLQPILSTSGGTSDARFIKDHCPVLEFGLVGHFMHQVDERVPVE
QVHQLKAIYQRILERYFA
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgccgcccgactgaccgccgacctgatccgctgcccctcggtgacgccgacc
gaaggcggcgcgctggtgctgctggccgatctgctgacggaagcggggttcgaggtgcat
cgcgtcgatcgcaacgacacgccgaacctgtttgcgcgctggggggccaggggcgcgcgc
agctttggcttcaacgggcataccgatgtggtgccgccgggcgatccggcctcgtggagc
catccgccctttggcgggcatctgcatgacgggctgatctggggccggggtgccaccgac
atgaaatcgggcgtcgcggcctttgtcgccgccgccatcgacttcgtgactgagaccccg
cccgatggtgcggtgatcctgaccatcaccggcgacgaggaaggcccggcgggcgatggc
accgtggcgcttctggactggatggtcgggcagggcgagcggatggatgtctgcatcgtc
ggagagccgtcgaaccccgaccggatgggcgagatgatcaagatcgggcgtcgcggctcg
atcaccttccgggtcgcggcgcgcggggtgcagggccatgcggcctatccccacctggcc
aggaacccgctgcatgcgctgacccagtttctgcatgacctgatcgccaccccgctggat
caggggtccgagcatttcgacgccagcggtttgcagatcacctcagtcgattgcggcaat
gcgtcctcgaacgtcattcccgaaacggcgacggcggtcatcaatatccgcttcaacgac
ctgcacagcggcgacagcctgatccgcgatctggacgcgcgcgcgcaggcgatcagcgaa
cgcaccggggtcgagctgaccctgtcggccagcatctcgggcgaaagcttcctgacccgg
cccggccccttcgtcgatctggtccgcgaggtggtcacggctgaaaccgggcttcagccg
atcctgtccaccagcggcgggacatcggatgcgcgtttcatcaaggatcactgtccggtg
ctggaattcgggctggtcggccatttcatgcatcaggtcgatgagcgtgtcccggtcgag
caggtacatcagctgaaggcgatctatcagcgcatccttgaaagatatttcgcatga
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