Paracoccus alcaliphilus: JHW40_06595
Help
Entry
JHW40_06595 CDS
T08960
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
palp
Paracoccus alcaliphilus
Pathway
palp02024
Quorum sensing
palp03060
Protein export
palp03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
palp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
JHW40_06595 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JHW40_06595 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JHW40_06595 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
palp02044
]
JHW40_06595 (ffh)
Enzymes [BR:
palp01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
JHW40_06595 (ffh)
Secretion system [BR:
palp02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
JHW40_06595 (ffh)
Eukaryotic Sec-SRP protein
JHW40_06595 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
AAA_16
AAA_14
AAA_33
AAA_31
Mlf1IP
AAA_19
ResIII
Thymidylate_kin
AAA_5
nSTAND_NTPase5
AAA_18
APS_kinase
AAA_7
ATPase_2
NACHT
nSTAND3
DO-GTPase1
KTI12
Motif
Other DBs
NCBI-ProteinID:
WCR19337
LinkDB
All DBs
Position
complement(1296335..1297834)
Genome browser
AA seq
499 aa
AA seq
DB search
MFENLSDRLGGVFDRLTKQGALSEDDVTAAMREVRVALLEADVSLPVARSFVKSVTSKAT
GAAVTKSITPGQQVVKIVHDELIKVLQGEDEPEALRIDNPPAPILMVGLQGSGKTTTTAK
LAKRLKDRERKRVLMASLDTQRPAAMEQLAILGQQIGVDTLPILPGQTAVQIAQRAKQQA
SLGGYDVYMLDTAGRLHIDQVLMDEVQAVRDIANPRETLLVVDGLTGQDAVNVATEFDGK
VGISGVVLTRMDGDGRGGAALSMRAVTGKPIRFVGLGEKMDALEGFDAQRVAGRILGMGD
IVALVEKAQEVLEVEQAERMMKRFQKGLFNMNDLKGQLEQMQKMGGMQSIMGMMPGMQKM
AKQAEAAGMDDSAVRRQIALINSMTKKERANPAILQASRKKRIASGAGMDVAELNRLLKM
QKQMADTMKKLGKMGKGGMLKQAMRAMTGKGGGLPDLENMDPTKMAEATKMLQDPKGLGG
QLGKAGLPGGLSGMFGGKK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagaacctttccgaccgtttgggcggcgtcttcgaccggctgaccaaacagggc
gcattgtccgaggatgacgtcaccgccgccatgcgcgaagtccgcgtggcactgctggag
gccgacgtttcgctgcccgtcgcgcgcagtttcgtcaagtccgtcacctccaaggccacc
ggcgcggcggtcacgaaatccattaccccgggccagcaggtcgtcaagatcgtccatgac
gaactgatcaaggtgttgcagggcgaggatgaacccgaagccctgcgcatcgacaacccg
cccgcgccgatcctgatggtgggcttgcagggctcgggcaagaccaccaccaccgcgaaa
ctggcgaagcgcctgaaggaccgcgagaggaaacgcgtgctgatggccagcctcgacacc
cagcgcccggccgcgatggagcagctggcaatcctcggccagcagatcggcgtcgatacc
ctgccgatcctgcccggccagacggcggtgcagatcgcgcagcgggcgaaacagcaggcc
agccttggcggctatgacgtctatatgctggataccgccgggcgtctgcatatcgatcag
gtgctgatggacgaggtgcaggcggtccgcgacatcgccaacccgcgcgagacgttgctg
gtcgtcgatggcctgaccggtcaggacgcggtgaacgtggcgaccgaattcgacggcaag
gtcgggatttccggcgtcgtgctgacccggatggacggcgacgggcgcggcggcgctgcg
ttgtcgatgcgcgcggtcaccggcaagccgatccgcttcgtcggtctgggcgagaagatg
gacgcgctggagggctttgacgcgcagcgcgtggcgggccggatcctcggcatgggcgat
atcgtcgccctggtcgaaaaggcgcaggaagtgctggaggtcgaacaggccgagcgcatg
atgaagcgtttccagaagggtctgttcaacatgaacgacctcaagggccagctggaacag
atgcagaagatgggcggcatgcagtcgatcatgggcatgatgcccggcatgcagaagatg
gccaaacaggccgaagccgcaggcatggacgacagcgccgtgcgccgccagatcgcgctg
atcaattcgatgacgaaaaaggaacgcgccaatcccgcgatcctgcaagccagccgcaag
aagcgcatcgcgagcggcgcgggcatggacgtggccgaactgaaccgcctgctgaagatg
cagaaacagatggccgacacgatgaagaagctgggcaagatgggcaagggcggcatgctg
aaacaggccatgcgcgccatgaccggcaagggcggcggactgcccgatctggagaacatg
gacccgacgaaaatggccgaggccacgaagatgctgcaagaccccaagggtctgggcggg
caactgggcaaggccgggctgccgggcggattgtccggcatgttcggcggcaagaagtga
DBGET
integrated database retrieval system
