Paracoccus alcaliphilus: JHW40_10055
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Entry
JHW40_10055 CDS
T08960
Symbol
choX
Name
(GenBank) choline ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
palp
Paracoccus alcaliphilus
Pathway
palp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
palp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JHW40_10055 (choX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
palp02000
]
JHW40_10055 (choX)
Transporters [BR:
palp02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
JHW40_10055 (choX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
WCR16770
LinkDB
All DBs
Position
complement(1969358..1970302)
Genome browser
AA seq
314 aa
AA seq
DB search
MTRTRTALCLALATALTAGTAAAAEPDQCRSIVFSDVGWSDITATTALTTTVLEALGYRT
ETKILSVPVTYTALSTDDVDVFLGNWMPTMAADIAPYDDAGTVDTVRTNLTGAKYTLATN
KAGADLGITDFAQIAEQKDSLGGQILGIEPGNDGNRLLLEMVAEDQFGLGTFEIVESSEQ
GMLAQVARADGAGKPVVFLGWEPHPMNAQFEMTYLQGGDDVFGPDLGGAEVRTNTRSGFV
EECPNIGQFLQNLEFTLAMENEVMGMILNDGQAPAAAAETWLKANPDAAMPWLEGVTTVD
GDDAQAALTEALAG
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaacccgcaccgccctatgtctggcgctggcgaccgcgctgaccgcaggcacc
gccgcggcggccgagcccgaccagtgccgcagcatcgtgttctcggatgtgggctggtcc
gacatcaccgccacgacggcgctgacgaccacggtgctggaggcgcttggttaccggacc
gagaccaagatcctgtcggtgccggtgacctatacggcgctgtccaccgatgatgtggat
gtgtttctgggcaactggatgccgaccatggcggccgatatcgccccctatgacgatgcc
ggaaccgtcgatacggtgcgcaccaacctgaccggcgcgaaatacacgctggccaccaac
aaggcgggcgccgatctgggaatcaccgatttcgcgcagatcgccgaacagaaagactcg
cttggcggccagatcctggggatcgagccgggcaatgacggcaaccgcctgctgctggag
atggtggccgaggatcagttcgggctgggcaccttcgagatcgtggaatccagtgaacag
gggatgctggcacaggtcgcccgtgccgatggtgcgggcaagccggtggtctttctgggg
tgggagccgcatccgatgaacgcccagttcgagatgacctatctgcagggcggcgacgat
gtcttcggtcccgatctgggcggggccgaggtgcgcaccaatacccgcagcggctttgtc
gaggaatgccccaatatcggccagttcctgcaaaatctggaattcacgctggcgatggaa
aacgaggtcatgggcatgatcctgaatgacggacaggccccggccgcggcggcggaaaca
tggctgaaggccaatcccgatgccgccatgccctggctggaaggtgtgaccacggttgac
ggcgacgacgcgcaggcggccctgaccgaggctctggccggctga
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