Paracoccus alcaliphilus: JHW40_13010
Help
Entry
JHW40_13010 CDS
T08960
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
palp
Paracoccus alcaliphilus
Brite
KEGG Orthology (KO) [BR:
palp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palp03032
]
JHW40_13010 (gyrA)
03400 DNA repair and recombination proteins [BR:
palp03400
]
JHW40_13010 (gyrA)
Enzymes [BR:
palp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JHW40_13010 (gyrA)
DNA replication proteins [BR:
palp03032
]
Prokaryotic type
DNA Topoisomerases
JHW40_13010 (gyrA)
DNA repair and recombination proteins [BR:
palp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JHW40_13010 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF5791
Motif
Other DBs
NCBI-ProteinID:
WCR19970
LinkDB
All DBs
Position
complement(2520301..2523045)
Genome browser
AA seq
914 aa
AA seq
DB search
MAHDGPVIDISAEMRTSYLDYAMSVIVSRAIPDLRDGLKPVHRRILYAMEETGNTSDKPY
RKSARPVGDVMGKYHPHGDGAIYDALVRMAQDFSMSLPLLDGQGNFGSMDGDPAAAMRYT
EVRMDKPAAYLLMDIDKDTVNFQDNYDGKDREPTVLPARFPNMLVNGAGGIAVGMATNIP
PHNLGEVVDATLALIEDPDLSAERIMEIIPGPDFPTGGLILGRSGARKAYLEGRGSVIIR
AKTHIEEPRKDRFAIVVDEIPYQVNKSTLIERIAELAKEKRVEGISSVQDESDRHGVRMV
IELKRDATPEVVLNQLFRFTALQTHFGCNMLALNHGRPEQLTLRDFLTHFIAFREEVVAR
RTAYELRKARERSHLLCGLAVAVSNVDEVVATIRSSADAAEARERLMERRWPAHEILEYL
RLIDDPLHPVNEDGTYNLSEAQARAILELRLQRLTQLGVQEVTDELKNLADAIREYLAIL
ASRERILGIISDELREVKERFAVARRTEITQWSGDMDDEDLIEREDMVVTITSGGYIKRT
PLAEFRSQRRGGKGLSGMATKEDDVVTTLFVANTHTELLFFTTDGMVYRLKTWRLPLGGR
TAKGKAIVNILPIEPGVSIAALLPMDAPEVEWDNYQVVFATDQGEVRRNALSDFTNIMRN
GKIAMKLPEGVSLIGVRMATTDDDVMLLTAQGRAIRFPTTAVRVFKGRDSTGVRGIRLAD
GDSVVSMAVIRHFEADPAERAAYLKMRRAVAGALDDGAEPDEDEEAVAEGSITQERYARM
SAAEDLILTITAKGAGKISSSHDYPVRGRGGQGVMAMDKAMRGGPLVASFPVEMDNQIML
ATSTGQSIRVPVDGISFRSRSAGGVRVFNTSNGEVVVSVARIEEPAGAVDEAEDDAATDG
NAGGPTDGAADNDE
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggcccatgacgggccggtgatcgacatcagcgccgagatgcggacttcctatctggac
tatgccatgtcggtcatcgtcagccgggcgattcccgacctgcgcgacgggctgaagccg
gttcaccggcgcatcctctatgcgatggaggagaccggcaacaccagcgacaagccctat
cgcaaatcggcccgcccggtcggcgacgtgatgggtaagtatcacccgcatggcgacggc
gcgatctatgacgcgctggtcaggatggcgcaggacttttccatgtcgctgccgcttctg
gacggtcagggcaacttcggcagcatggacggcgatcccgccgccgcgatgcgctatacc
gaggtgcggatggacaagcccgccgcctatctgctgatggatatcgacaaggacacggtc
aatttccaggacaactatgacggcaaggaccgcgaaccgacggtcctgccggcgcgtttc
ccgaacatgctggtcaatggcgcgggcggcatcgccgtcggcatggccaccaatatcccg
ccgcacaatctgggcgaggtcgtggacgccacgctggccttgatcgaggatcccgacctg
tcggccgaacggatcatggagatcatccccggcccggatttccccaccggcgggctgatc
cttggacgttccggcgcgcgcaaggcctatctggaggggcgcggcagcgtcatcatccgc
gcgaaaacccatatagaggagccgcgcaaggaccgtttcgccatcgtcgtggacgaaatc
ccctatcaggtgaacaaatccaccctgatcgagcggatcgccgaactggccaaggaaaag
cgggtcgaggggatttccagcgttcaggacgaatccgaccggcatggcgtccgcatggtg
atcgagctgaaacgcgacgccacgcccgaggtggtgctgaaccagctgttccgctttacc
gcgctgcaaacccatttcggctgcaacatgctggccctgaaccacggccggcccgaacag
ctgacgctgcgcgacttcctgacccatttcatcgccttccgcgaagaggtcgtggcccgg
cgcaccgcctatgagctgcgcaaggcgcgcgagcgcagccatctgctgtgcggtctggcc
gtcgcagtcagcaatgtcgatgaggtcgtggcgacgatccggtcatccgccgacgccgcc
gaggcgcgagagcggttgatggaacgccgctggcccgcccatgagattctggaatatctg
cgcctgatcgacgacccgctgcatccggtgaacgaggacgggacctataacctgtccgag
gctcaggcccgcgcgattctggaactgcgcctgcaacgcctgacccagctgggtgtgcag
gaagtcaccgacgagctgaaaaaccttgccgatgcgatccgcgaatatctggccatcctc
gcctcacgcgaacgtatcctcggcatcatcagcgacgagctgcgcgaggtgaaggaacgc
tttgccgtggcccgccggaccgagatcacccagtggtcgggcgacatggacgacgaggac
ctgatcgagcgcgaggacatggtcgtcaccatcacctcgggcggctatatcaagcgcacg
ccgctggccgaattccgcagccaacggcgtggcggcaagggcctgtccggcatggccacc
aaagaggacgatgtcgtcactaccctgttcgtcgccaatacccataccgaactgctgttc
ttcaccaccgatggtatggtttaccggctaaagacatggcggctgccgctgggtgggcgc
acggccaagggcaaggccatcgtcaacattctgccgatcgagcccggtgtttccatcgcc
gccctgctgccgatggacgcgcccgaggtcgaatgggacaattatcaggtcgtctttgcc
accgatcagggcgaggtgcgccgcaacgcgctgtcggacttcaccaatatcatgcgcaac
ggcaagatcgcgatgaagctgcccgagggcgtcagcctgatcggcgtacgcatggcgacg
accgatgacgatgtgatgctgctgaccgctcagggtcgcgcgatccggttcccgaccacc
gctgtccgcgtcttcaagggccgcgattcgaccggcgtgcgcggcatccgtctggcggat
ggcgacagcgtcgtcagcatggccgtgatccgtcacttcgaggccgatccggccgaacgc
gcggcctatctgaagatgcgccgtgccgtggccggtgcgctggatgacggggccgaaccc
gacgaggacgaagaggccgtggccgagggcagcatcacccaggaacgctatgcccggatg
tcggcggccgaagatctgatcctgaccatcaccgccaagggcgcgggcaagatcagctcc
agccacgattacccggtgcgcgggcgcggcggtcagggcgtcatggcgatggacaaggcc
atgcgcggcggcccgctggttgccagcttcccggtggaaatggacaaccagatcatgctg
gcgacctcgaccgggcagtcgatccgggtgccggtggacgggatcagcttccgttcgcgc
agcgcaggcggggtgcgggtcttcaataccagcaatggcgaggtcgtggtctcggtcgcg
cggatcgaggaaccggcgggcgccgtggatgaggccgaggacgacgccgccacggatggc
aacgcaggcggccccaccgatggcgccgcagacaacgacgaatga
DBGET
integrated database retrieval system
