Paracoccus alcaliphilus: JHW40_13905
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Entry
JHW40_13905 CDS
T08960
Name
(GenBank) methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
palp
Paracoccus alcaliphilus
Pathway
palp00450
Selenocompound metabolism
palp00970
Aminoacyl-tRNA biosynthesis
palp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
JHW40_13905
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JHW40_13905
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
palp01007
]
JHW40_13905
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palp03016
]
JHW40_13905
Enzymes [BR:
palp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
JHW40_13905
Amino acid related enzymes [BR:
palp01007
]
Aminoacyl-tRNA synthetase
Class I (U)
JHW40_13905
Transfer RNA biogenesis [BR:
palp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
JHW40_13905
Prokaryotic type
Other AARSs
JHW40_13905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
Anticodon_3
tRNA-synt_1
Anticodon_1
DZR_2
Motif
Other DBs
NCBI-ProteinID:
WCR17425
LinkDB
All DBs
Position
2680628..2682346
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AA seq
572 aa
AA seq
DB search
MARHLITSAIPYINGIKHLGNLVGSQLPADLCARYLRGRGHEVMFICATDEHGTPAELAA
QKAGQPVAEFCAQMHGVQADIARRFGLSFDHFGRSSSQRNQVLTQHFAGQLADNGYIAEV
SEKQVYSVDDGRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLIDPRSAISGSTN
LEVRETKHLYLRQSLLKDQISDWIDSKHDWPILTTSIARKWLNDGDGLQDRGITRDLHWG
VPVKRGDQPWPGMEGKVFYVWFDAPIEYIAATAEWADAHGRPDADWRRWWRLDEGAKDVT
YTQFMGKDNVPFHTLSFPATIIGSGEPWKMVDYIKSFNYLTYDGGQFSTSQGRGVFMDHA
LEILPADYWRWWLLSHAPESGDSEFTWDNFQQSVNKDLADVLGNFVSRITKFCRSKFGET
IPEGGEYGPEESRLIEALTTRIHAYDGFMAAMEVRKSAAELRAIWVLGNEYLQGAAPWST
FKTDPEKAAMQVRLGLNLIRLYAVLSAPFIPFTADAMLAAMQTDNRDWPDDVATALTALP
ASHAFTVPEVLFAKISDESREEWQARFQGVRA
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccacctgattacctcggcaatcccctatatcaacggcatcaagcatctgggc
aacctcgtcggttcgcaattgcccgccgatctttgcgcccgctatctgcgcgggcgcggg
catgaggtcatgttcatctgcgccacagacgaacatggcacgcccgccgaactggccgca
cagaaggcgggccagccggtggcagagttctgcgcccagatgcacggggttcaggccgat
atcgcccgccgcttcggcctgtccttcgaccatttcgggcgttcatccagccagcgcaac
caggtgctgacccagcatttcgccgggcagctggccgataacggctatatcgccgaggtc
agcgagaagcaggtctattccgtcgatgacgggcgtttcctgcccgaccgctatatcgag
ggcacctgtccgaattgcggttacgacaaggctcgcggcgatcaatgcgagaactgcacc
aagcagctggacccgaccgacctgatcgatccgcgcagcgcgatctcgggcagcaccaat
ctggaagtgcgcgagaccaagcatctctatctgcgccagtcgttgctgaaggatcagatc
agcgactggatcgacagcaagcatgactggccgatcctgaccacctccatcgcgcggaaa
tggctgaatgacggcgacgggttgcaggaccggggcatcacccgcgacctgcattggggc
gtaccggtcaagcgcggcgatcagccgtggccagggatggagggcaaggtcttctatgtc
tggttcgacgcgcccatcgaatatatcgccgccaccgccgaatgggccgatgcgcatggc
aggcccgatgccgactggcgccgctggtggcgtctggacgagggcgccaaggacgtgacc
tatacccagttcatgggcaaggataacgtgcccttccacacgctgtccttccccgccacc
atcatcggttcgggcgagccgtggaagatggtcgattacatcaagtccttcaactatctg
acctatgacggcgggcaattcagcacctcgcaggggcgcggcgtcttcatggatcacgcg
ctggagatcctgcccgccgattactggcgctggtggcttctgtcccacgccccggaatcg
ggtgacagcgagttcacctgggacaatttccaacaatcggtgaacaaggatctggccgat
gtgctgggcaatttcgtcagccggatcaccaagttctgccgttccaaattcggcgaaacc
atccccgaaggcggcgaatacggccccgaggaatcccgcctgatcgaggcgctgaccacc
cgcatccacgcctatgacggcttcatggccgcgatggaggtgcgcaaatccgccgccgag
ctgcgcgccatctgggttctgggcaacgaatatctgcaaggcgcggcgccgtggtccacc
ttcaagaccgacccggaaaaggccgccatgcaggtgcgtctggggctgaacctgatccgg
ctttacgcggtgctgtcggcgcccttcatcccgttcacggcggatgcgatgctggcggcg
atgcagaccgacaaccgcgactggcccgatgacgtggcgacggccctgaccgccctgccc
gccagtcacgccttcaccgtgcccgaggtgctgttcgccaagatcagcgacgaaagccgc
gaggaatggcaggcccgctttcagggcgtgcgggcctga
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