Paracoccus alcaliphilus: JHW40_14025
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Entry
JHW40_14025 CDS
T08960
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
palp
Paracoccus alcaliphilus
Brite
KEGG Orthology (KO) [BR:
palp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
palp03009
]
JHW40_14025
Enzymes [BR:
palp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
JHW40_14025
Ribosome biogenesis [BR:
palp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JHW40_14025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRM5-TYW2_MTfase
MTS
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
WCR17447
LinkDB
All DBs
Position
2708273..2709517
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AA seq
414 aa
AA seq
DB search
MSLWRVERLGRRGDGVAIGADGRALAPLTLPGEEIEGEAQDGRIAAPRILTPSPRRVRPI
CAHYRACGGCSLMHADDGFATEWKRQVVETALAAQGLAAPVQGVHVSPPLSRRRAVLSGR
RTKKGALLGFHARASDVITDLAQCHVLRPEITAALPLLRQMVMTGASRSAELSITVISGP
AGLDVAISGGKALEPALFQDLARLAETGDLARLDWNGQAITRRPPTLPMGRARVIPPPGA
FLQATAEGEAALLAAVRDITRDATRIVDLFAGCGTFSLPLAERAEVLAIEGLAAPLAALD
AGWRGAPGLHRIATQTRDLARRPLLADELADFDAIVIDPPRAGAEAQAREIARSTVRKLA
FVACDPVNFARDARILADGGYILSRVFIVDQFRWSPHVETVAEFAKNWPAVRVS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagcctttggcgcgtcgagcgtctgggccgtcgcggcgacggcgttgccatcggcgcg
gatggccgggcgctggccccgctgaccctgcccggcgaagagatcgagggcgaggcacag
gatggccgcatcgccgcaccgcgcatcctgaccccctcgccccggcgcgtgcggcccatc
tgcgcccattaccgcgcttgcggtggctgttcgctgatgcatgccgatgacggtttcgcg
accgaatggaagcggcaagtggtcgagaccgcgctggccgcgcagggtctggccgcgcct
gttcaaggggtccatgtctcgccgccgctgtcgcgcaggcgggcggtgctgtcggggcgg
cgcacgaaaaagggcgcgctgctgggctttcacgcgcgggcctcggatgtgattaccgat
ctggcgcaatgccatgtcctgcgccccgagatcaccgccgcgctgcccttgctgcggcag
atggtgatgacgggcgcctcgcgctcggccgagctgtcgatcaccgtcatcagcggcccc
gccgggctggatgtcgcgatcagcggcggcaaggcgctggaacccgccctgtttcaggat
ctggcgcggctggcagagaccggcgatctggcgcggcttgactggaacggtcaggccatc
acccgccgcccgcccacgctgccgatgggccgggcgcgggtgatcccgccccccggtgcc
ttcctgcaagccaccgccgagggcgaggccgcgctgctggccgccgtgcgcgacatcacc
cgcgacgccacccggatcgtcgatctgttcgcgggctgcggcaccttttccctgcctctg
gctgagcgggccgaggtgctggccatcgagggtctggccgccccgctggccgcgctggat
gcgggctggcgcggcgcaccgggactgcaccgaatcgcgacgcagacccgcgatctggcc
cgacgcccgcttctggcagatgagctggcggattttgacgcaatcgtgatcgacccgccc
cgcgccggggccgaggcacaggcccgcgaaatcgcccgttcgaccgtgcgcaagctggcc
ttcgtcgcctgcgatccggtgaattttgcaagggatgcgcggattttggccgatggcggc
tatatcttgtcacgggttttcatcgtcgatcagttccgctggtccccgcatgtcgaaacc
gttgccgagttcgcgaaaaactggccagcggtaagggtttcgtga
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