Paracoccus alcaliphilus: JHW40_16030
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Entry
JHW40_16030 CDS
T08960
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
palp
Paracoccus alcaliphilus
Brite
KEGG Orthology (KO) [BR:
palp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
palp01002
]
JHW40_16030
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
palp01011
]
JHW40_16030
Peptidases and inhibitors [BR:
palp01002
]
Cysteine peptidases
Family C82
JHW40_16030
Peptidoglycan biosynthesis and degradation proteins [BR:
palp01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
JHW40_16030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
WCR20019
LinkDB
All DBs
Position
complement(3096681..3098267)
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AA seq
528 aa
AA seq
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MVLMAGQSVVAQPAAPQAGLAPLHAAIAPRLEFSADEMALARAAAANPVVAAFYGANGLQ
PVFDGPEGQIRREAVQRAVSDSGSHGIPVSRYRPDLLAGAGQDLAAEIAHAEALARYLSD
LTGGMIRPGRVSAQIHRQVNRPAVDRLMAEFIASDDPAGFLESVAPQHPAYEVLRRALAE
RPALTAPPDLPKAPEAVWRVGMRGEGVVPLRRRLAAIGFGAAGPADLYDATLAAEVMRYQ
QAIGLPADGIAGPRTIRALNAGLDEGSRRIIMSLERMRWLAGEDLQARHVWVNIPEFTAR
IFDQGQQVFQTRTVVGTTDADRQTPEFSDQMEYVVVNPRWNVPRSITVRDYLPQLKANRH
AVSHIDVVDGAGRVIPRGQIDFSRYTAANFPFRMQQKPGDNNALGLVKFIFPNPWNIYLH
DTPTKHLFGNRSRAYSNGCIRIGDPFDLAHVLLSQQTDDPQAMFRRALEGGRERWLALTP
NVPVHLVYFTAFPDADGRVAFHDDIYGRDEALWPLIEQAGLDSRARSD
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgatggccgggcaatctgtggttgcgcagccagccgcgccacaggccggtctt
gcgcctttgcatgccgccatcgccccccggcttgaattttcggctgatgaaatggctctg
gcgcgggctgcggcggcgaatcccgtggtcgcggccttttatggcgcgaatggtttgcag
ccggttttcgacgggcccgagggacagattcggcgcgaggccgtgcagcgggccgtatcc
gacagcggctctcatggcatcccggtttcgcgttaccgccccgacctgctggccggtgcc
gggcaggatctggcggcagagatcgcccatgccgaggctctggcacgctatctgtccgat
ctgaccggcgggatgatccggccggggcgggtcagcgcgcagattcaccggcaggtcaac
cgacccgccgtggatcgactgatggccgaattcatcgccagcgatgatccggcgggcttt
ctggaatcagtcgcgccgcagcacccggcctatgaggtcttgcggcgggcgctggcagag
cgtcccgccctgaccgcgccgcccgatctgcccaaggcgcccgaagccgtctggcgcgtc
ggtatgcgcggcgagggcgtcgtaccgctgcgtcggcgtctggccgccatcggctttggc
gcggccggccccgccgatctttacgacgcgacgcttgcggccgaggtcatgcgctatcag
caggcgatcgggctgcccgccgatggcatcgccggtccgcgcacgatccgggcgctgaat
gccgggctggacgagggcagccgtcgcatcatcatgtcgctggagcggatgcgctggctg
gccggcgaggatttgcaggcccgtcacgtctgggtgaacatccccgaattcaccgcgcgg
attttcgatcagggccagcaggttttccagacccgcacggttgtcggcaccactgatgcc
gaccggcagacgccggaattctcggaccagatggaatatgtcgtggtcaatccgcgctgg
aacgtgccgcgctcgattacggtgcgggactatctgccgcagctgaaggccaaccggcac
gcggtgtcgcatattgatgtcgtcgatggcgccgggcgggtgattccgcgcggacagatc
gacttttcgcgctatacggcggcgaattttccctttcggatgcagcagaagccgggcgac
aacaatgcgctggggctggtgaaattcatctttcccaatccgtggaacatctatctgcac
gacaccccgaccaagcatctgttcggcaatcgcagccgcgcctattccaacggctgtatc
cgtatcggcgatccgttcgatctggcccatgtgctgctgtcgcagcagaccgacgatccg
caggcaatgttccgccgcgcgctggagggcgggcgtgaacgctggctggcgctgacgccg
aatgtgccggtgcatctggtctatttcaccgcctttcccgatgccgatggaagggtcgca
ttccacgacgatatctatggccgggacgaggcgctttggccattgattgaacaggccggg
ctggattcgcgcgcgcggagcgattaa
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