Paracoccus alcaliphilus: JHW40_16680
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Entry
JHW40_16680 CDS
T08960
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
palp
Paracoccus alcaliphilus
Brite
KEGG Orthology (KO) [BR:
palp00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
JHW40_16680
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
HHH_3
Tex_N
HHH_9
S1
HHH_7
YqgF
S1_RRP5
T2SSK
RNase_II_C_S1
DUF460
OB_RRP5_4th
HHH_6
Motif
Other DBs
NCBI-ProteinID:
WCR17908
LinkDB
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Position
complement(3231655..3233973)
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AA seq
772 aa
AA seq
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MALADATADRIARIIATEISAAPAQVRAAAELLDGGATVPFVARYRKEVTGGLDDTQLRN
LSDRLAYLREMEARRAAILNSVKEQGKLTDDLARAIAGAETKAALEDIYLPFKPKRRTKA
MIARENGLEPLLRAIQDDRAADPAALAAGYITDAVPDVKSALDGARDILVEELSENASLL
GSLRDFMRRDAFIAAKVIAGKEEAGAKFSDYFDHREKWADIPSHRALAILRAAKEEILTI
DISPDPETGAQRAEGIVIRAIGTLGDRPGDQWLRQVAGWTWRVRLSNTMYIDLMTELRKR
AHDEAIRVFGRNLKDLLLAAPAGPRVTIGVDPGIRTGCKIAVVDATGKLLDTATIYPFQP
KNDLRGAEATLLALIAKHGADLIAIGNGTASRETERLVAEVLKRLPKGVKQPTKVVVSEA
GASVYSASELAAKEFPDLDVSLRGAVSIARRLQDPLAELVKVPPESIGVGQYQHDVDQRQ
LAKTLEAVVEDAVNAVGVDLNMASAPLLAHVAGLGPSLAQNIVAWRDENGAFPSRAALKK
VTGLGPRAFEQCAGFLRIQGGKEPLDASSVHPEAYGVARKIVAACGRDIRAIMGDGTVLK
GLRAEQFVDDSFGLPTVRDILAELEKPGRDPRPGFVTASFADGIEDIKDLRPGMSLEGTV
TNVAAFGAFVDIGVHQDGLVHISQLADRFIKDPNEVVKVGDVVRVRVTEVDVPRKRIGLT
MRKDGGAQHDRGARPSQGKGDRQHAVASKPAPRTGSDTGSLGAALMDAMRRK
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
ttggcccttgccgacgccaccgccgaccgtatcgcccgcatcatcgcgactgaaatcagc
gccgcgcccgctcaggtccgggcggcggcggaattgttggatggcggcgcgaccgtgccc
ttcgtcgcgcgttaccgcaaagaggtcaccggcgggttggacgatacgcagttgcgcaac
ctgtccgaccggctggcctatctgcgcgagatggaggcgcggcgggcggcgatcctgaac
tctgtcaaggagcagggcaagctgaccgacgatctggcccgcgccattgccggggccgaa
accaaggccgcgctcgaagacatctatctgccgttcaagcccaagcgccgcaccaaggca
atgattgcccgcgaaaacgggctggagccgctgctgcgcgccattcaggacgaccgcgcc
gccgatccggctgccttggccgccggttacatcaccgacgccgtgccggatgtgaaatcc
gcgctggacggcgcgcgcgacattctggtcgaggagctgtcggaaaacgcctctctgctg
gggagtctgcgcgatttcatgcgccgcgacgccttcatcgccgccaaggtgattgccggg
aaagaggaggccggcgccaagttcagcgactatttcgaccatcgcgagaaatgggccgat
atcccctcgcatcgtgcgctggcgatcctgcgggcggcgaaagaggaaatcctgaccatc
gacatctcgcccgaccccgagaccggggcgcagcgagccgagggtatcgtgatccgcgcc
atcggcacgcttggcgaccggcccggcgatcagtggctgcggcaggtggcgggctggaca
tggcgggttcggctgtcgaacaccatgtatatcgacctgatgaccgagctgcgcaaacgc
gcccatgacgaggcgatccgcgtctttggccgcaacctcaaggatctgctgctggccgcg
cctgcggggccgcgcgtgaccatcggcgtcgatcccggcatccgcaccggctgcaagatc
gcggtcgtcgatgccaccggcaagctgctggacacggcgacgatctatcccttccagccc
aagaacgacctgcgcggggccgaggccacgctgctggcgctgatcgcgaaacatggtgcc
gacctgatcgccatcggcaacggcaccgccagccgggaaaccgagcggctggtggccgag
gtgctgaaacgcctgcccaaaggcgtcaaacagccgacgaaggtggtcgtcagcgaggcc
ggggcttcggtctattcggcatccgaactggcggcgaaggaattccccgatctggatgtc
agcttgcgtggcgcggtctcgatcgcgcggcgcctgcaggatccgctggccgaactggtc
aaggtgccgcccgaatcgatcggggtcgggcaatatcagcatgatgtggaccagcgccag
cttgccaagacgctggaggcggtggtcgaggatgccgtgaacgccgtcggcgtggacctg
aacatggcatccgcgccgcttctggcccatgtcgccgggctggggccgtcgctggcgcag
aatatcgtcgcatggcgcgatgagaacggcgcctttccgtcccgggccgcgctgaagaag
gtgaccggccttggcccccgcgccttcgagcaatgtgcgggcttcctgcgtatccagggc
ggcaaggagccgctggatgcctcctcggttcaccccgaggcttacggtgtggcccgcaaa
atcgtcgccgcctgcggtcgtgatattcgcgcgatcatgggtgacgggacggtgctgaag
gggctgcgggcggaacagttcgtggatgacagtttcggcctgcccaccgtgcgcgacatt
ctggcggaactggaaaaacccggccgcgacccgcgccccggctttgtcaccgccagcttt
gccgacgggatcgaggatatcaaggacctgcgcccgggcatgtcgctggaaggcacggtg
acgaatgtggcggccttcggtgccttcgtcgatatcggcgtgcatcaggatgggctggtc
catatcagccaactggccgaccgcttcatcaaggacccgaacgaggtcgtgaaggtcggt
gatgtcgtccgcgtccgcgtgaccgaggtcgatgtgccacgcaaacgcatcgggctgacc
atgcgcaaggatggcggtgcgcagcacgaccgtggcgcccgcccgtcgcagggcaagggc
gacaggcagcacgctgtcgcatcgaaacccgcgccccggaccggcagtgacaccggcagt
cttggcgcggcgctgatggatgcgatgcggcggaaatga
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