Paracoccus alcaliphilus: JHW40_18320
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Entry
JHW40_18320 CDS
T08960
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
palp
Paracoccus alcaliphilus
Pathway
palp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
palp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JHW40_18320 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palp03400
]
JHW40_18320 (mutM)
Enzymes [BR:
palp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
JHW40_18320 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JHW40_18320 (mutM)
DNA repair and recombination proteins [BR:
palp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JHW40_18320 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
IBR
Motif
Other DBs
NCBI-ProteinID:
WCR18193
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All DBs
Position
3554726..3555571
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AA seq
281 aa
AA seq
DB search
MPELPEVETVRRGLQPHLEGQRIARAEARRPDLRWPLPPDLVQVLTGARVTALRRRSKYL
LADLDRGGTVLMHLGMSGRMLVEGAGLAGFHRDPSVLARHDHVVLVTESGTTITFNDARR
FGMVDLIRDGTAHPLLDHLGPEPFDPGFNAAYLAARFAGRRAPVKQALLDQRIVAGLGNI
YVSEALHRAHIDPRRAAGRIGAARLEALAGHIREVLADAIAAGGSSLRDHRQASGELGYF
QHSFRVYDREGAPCPAPGCAGIIRRVVQSGRSSFYCPGCQR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
ttgccagaactgcccgaagtcgaaaccgtccgtcgcggccttcagccgcatctggagggt
cagcgcatcgcccgggccgaggcccgccgccccgatctgcgctggccgctcccccccgat
ctggtgcaggtgctgaccggggccagggtgacggcgctgcgccggcgatcgaaatacctg
ctggcggatctggatcgcggcggcacggtgctgatgcatctgggcatgtcgggccggatg
ctggtcgagggtgcggggctggccggtttccaccgcgatccgtcggtgctggcgcgccac
gatcatgtcgtgctggtgacggaatcgggcaccaccatcaccttcaacgatgcccgccgc
ttcggcatggtcgatctgatccgtgacggcaccgcccatccgctgctggaccaccttggc
ccagaacccttcgatccgggtttcaacgccgcctatctggccgcgcgtttcgcaggtcgc
cgcgcgccggtgaaacaggcgctgctggatcagcgcatcgttgccgggctgggcaatatc
tatgtcagcgaggcgctgcaccgcgcgcatatcgacccgcgccgggcggcggggcggatc
ggggccgcgcggctggaggcgttggcgggccatatccgcgaggttctggccgatgccatc
gcggcgggcggatcatccctgcgcgatcaccgtcaggccagcggcgaactgggctatttc
cagcacagcttccgcgtctatgaccgcgagggcgccccctgccctgcgcccggctgcgcc
ggcatcatcaggcgggtggtccagtcgggccggtccagcttttactgccccggctgccag
cgctga
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