KEGG   Paracoccus alcaliphilus: JHW40_22315
Entry
JHW40_22315       CDS       T08960                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
palp  Paracoccus alcaliphilus
Pathway
palp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:palp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JHW40_22315 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:palp02044]
    JHW40_22315 (tssM)
Secretion system [BR:palp02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JHW40_22315 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical IstB_IS21 nSTAND_NTPase5 NCMAP AAA_28 AAA_22 AAA_24 AAA_11
Other DBs
NCBI-ProteinID: WCR20956
LinkDB
Position
p305818:28467..32009
AA seq 1180 aa
MRVLKKVFGFLISRFLWTLVGIAVLCALIWFYGPLVSVGDFQPLAPDLTRIVVIGAIIIL
WLVLILLRQMRAAKANRVFVSELAATPQPGPGEEGLAEVQSKFQTVLEQMKRSKLGGRKF
LRDMPWYVIIGPPGTGKTTALRQSGLHFPIDLSDDLKGIGGTRNCDWFFTEDAVLIDTAG
RYVQQQSDPDADAVEWKGFTGLLVKHRGRRALNGVILALSVQELAGDDTSIREHGREIRK
RLAELREQTGLKLPVYLMITKTDLVPGFEEFFGDLNSREREQVWGATLGTADRVDGLTVE
REMKVLQEALEKRLGARIAEDLPLPQRAAVFRFPSQLNQLTGPLKVLTEAVFGESRYEES
PWLRGVYFTSATQEGSPIDRMVVGIARSLGLSAPPPEQRRHGERRSFFLRNLLTELIFPE
AGLGRFDPRAEERRRWIWRGALAIASAAVVLSGTLFLFSYLRWNGVLGDQERQLADLNAR
LANVAARQAPTDPLDLNLALDAVNETAQAATPAPDGPLVVAGPGARPELEQVNTIAYDRT
LRNILEPRMVAMLEATMWRHSRDPEFLLDALKAYQMLTGQAPYDAEFLGIWWQTELPQYA
PIDPFPTDESVDHQLAALARMRSEETKIAPDPQLVSVALESICTIPLAVRAYRNLRSDGA
VAGLAEWVPADVAGPNGARVLTRLSEKTLRIGLPGAFTYDGFHDAVLPLVPEVAAQALLD
RAVFAGGCNESATASAEQLEADILKLYYDDFTALWDGFLRDIRLAPISDLAEAQHNLRDL
SSADSALKRLLEAVVAETDLTRPVPEEQGVDTAAATQVGMRATRKLGMVGKLIRTGVKVA
GPGGGDGPSQEPVLPGKQVSDHFVAIRATVQEVDGQPPLLGDAVTALAALSNELQTVAAS
PDPQSALLARGGLPQLTGSIANEAARLPDPVDKWVAGLAGDTISVTREAVIAQLNARWRA
DVLPFCQSATAGRYPFDQSSGIDVNTQDFQRLFGRDGLIDSFTTENLQAYIDTTVRPWQW
RADLGLDATLLAQFERARSMRDALFPGGSGPVMAFTLNPMDLSANASRVTLNVDGQVLSY
FNAATRPEPMTWPGRDGTNMITLSFAPVDGSGEVITSESGSWAFLRLIRRGQLSPTGQPD
AFALRLSAQGFSASFELRANSVENPFDLAMFSGFSCPRGF
NT seq 3543 nt   +upstreamnt  +downstreamnt
atgcgcgtgctcaagaaggttttcggatttctgatctcgcgcttcctgtggacgctggtc
gggatcgcggtgctgtgcgcgctgatctggttctatgggccgctggtgtctgtcggtgac
tttcagcccctggcgccggatctgacgcgaatcgtcgtgatcggggcgatcatcatcctg
tggctggtgctgatcctgctgcgccagatgcgcgccgccaaagccaaccgggttttcgtc
tcggaactggccgccacgccgcaacccggccccggagaggaaggtctggccgaggtccag
tcaaagttccagacggttctggaacagatgaagcggtccaagctgggcgggcggaaattc
ctgcgcgacatgccgtggtatgtcatcatcggcccgcccggcaccggcaagaccaccgcc
ctgcgccagtcgggcctgcatttccccatcgatctgtccgacgacctgaaggggatcggc
ggcacccgcaactgcgactggttctttaccgaagatgccgtgctgatcgacaccgccggt
cgttacgtccagcagcaatcggaccccgatgccgatgccgtcgaatggaaggggttcacc
ggactgctggtcaaacatcgcggacgacgggcgctgaacggcgtgattctggcgctgtcg
gtgcaggaactggcgggcgacgatacctcgatccgcgaacatggccgcgagatccgcaag
cgtctggccgaattgcgcgaacagaccgggctgaagctgccggtctatctgatgatcacc
aagaccgatctggtgccgggtttcgaggaattcttcggcgatctcaattcgcgcgaacgc
gaacaggtctggggggcgacactgggcacggccgaccgggtcgatgggctgaccgtcgag
cgcgagatgaaggtgctgcaagaggcgctggaaaaacggctgggcgcccgcatcgccgag
gacctgcccctgccgcagcgggcggccgtgttccgctttccgtcgcagctgaaccaactg
acggggccgctgaaggtgctgaccgaggcggtcttcggcgaaagccgctatgaggaaagc
ccgtggcttcgcggggtctatttcacctcggccacgcaagagggatcgcccatcgaccgg
atggtggtcggcatcgccagatcgctgggattgtccgcgccgccccctgaacaacgccgc
cacggtgaaaggcgcagcttctttctgcgcaatctgctgaccgagctgatcttccccgag
gccggtctgggccgtttcgacccccgcgccgaggaacgccgccgctggatctggcgcggc
gcgctggccatcgcctcggctgcggtggttctgtcgggcacgttgtttctgttctcatat
ctgcgctggaacggggtgcttggcgatcaggaacgtcagctggccgatctgaacgcgcgg
ctggccaatgtcgcggcccggcaggcgccgaccgatccgctggacctgaaccttgcgctg
gatgcggtgaacgagaccgcgcaggccgcgaccccggcccccgatggcccgctggtcgtg
gcaggccccggcgcccgacccgaactggaacaggtcaacaccatcgcctatgaccggacg
ctgcgaaacatcctcgaaccccggatggtggccatgctggaggcgacgatgtggcggcac
agccgcgacccggagttcctgctggacgcgttgaaggcctatcagatgctgaccggacag
gccccctatgacgccgaattcctggggatatggtggcagaccgaattgccccaatatgcg
cccatcgacccgttcccgaccgatgaaagcgtcgatcatcaactggcggcgctggcccgg
atgcggtccgaggaaaccaagatcgcccccgatccgcagcttgtgtcggtcgcactggaa
agcatctgcaccattccgctggcggtccgcgcctatcgcaacctgcgctcggacggggcg
gtggcgggactggcggaatgggtgcccgccgatgttgccgggccgaacggcgcccgcgtg
ctgacgcgcctgtcggaaaagacgctgcgcatcggtctgcccggcgcctttacctatgac
ggttttcacgatgcggtgctgccgctggtgcccgaggtcgcggcgcaggcgctgctggac
cgtgccgtctttgccggtggctgcaacgaaagcgccacggcctcggcagagcagctggag
gccgatatcctcaagctctattacgacgatttcactgccctgtgggatggctttctgcgc
gacatccggctggccccgatctctgatctggccgaggcgcaacacaatctgcgggatctg
tcgtcggccgacagcgcattgaaacggctgctggaggccgtcgtggctgagaccgacctg
acccgcccggtccccgaagagcagggcgtcgataccgcagccgcgacacaggtcgggatg
cgggccacccggaaactggggatggtgggcaagctgatccgaaccggcgtgaaggtcgcg
gggccgggcggcggcgatggcccgagccaagagccggttctgcccggcaagcaggtctcg
gaccatttcgtggcgatccgcgccaccgtccaagaggtcgatggccagcctccgctgttg
ggtgatgcggtgacggcgctggccgcattgtcgaacgaattgcagaccgtcgccgccagt
cccgatccgcaatcggcgctgttggcccggggcgggctgccgcaactgaccggcagcatc
gccaacgaggccgcgcgcctgcccgatcccgttgacaaatgggtggcgggccttgccggc
gatacgatcagcgtcacgcgcgaggcggtgatcgcgcaattgaatgcccggtggcgggcc
gatgtgctgcccttctgccaatcggcgaccgcagggcgctatcccttcgatcaatcctcg
ggcatcgacgtgaacacgcaggacttccagcgcctgttcggacgcgacgggctgatcgac
agctttaccaccgagaaccttcaggcctatatcgacaccacggtccggccctggcaatgg
cgggccgatctggggctggacgccacgctgctggcccagttcgagcgggcgcgttcgatg
cgcgatgcgctgtttccgggcggttccgggccggtcatggccttcacgctgaaccctatg
gacctgtcggccaatgccagccgggtgacgctgaatgtcgatggtcaggtgctgagctat
ttcaacgccgccacccggcccgagccgatgacatggcccggacgggacggcaccaacatg
atcacgctcagcttcgcgccggtggatggcagcggagaggtcatcacctcggaaagcggc
agttgggcgtttctgcggctgatccggcgcggccagctgtcgccgacggggcagcccgac
gccttcgcgctgcgactgtcggcgcaggggttctcggccagtttcgagctgcgcgccaat
tcggtcgaaaacccgttcgatctggcgatgttctcgggcttcagctgcccgcgcgggttc
tag

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