KEGG   Paracoccus alcaliphilus: JHW40_22325
Entry
JHW40_22325       CDS       T08960                                 
Symbol
tssI
Name
(GenBank) type VI secretion system tip protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
palp  Paracoccus alcaliphilus
Pathway
palp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:palp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JHW40_22325 (tssI)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:palp02044]
    JHW40_22325 (tssI)
Secretion system [BR:palp02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JHW40_22325 (tssI)
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V Gp5_C DUF6484 Gp44-like_2nd
Other DBs
NCBI-ProteinID: WCR20958
LinkDB
Position
p305818:complement(32499..34841)
AA seq 780 aa
MPTERFAELQSPLPGEDALESTPMAEFSGLAFHGMQGRDSLSRCFEFDIAAISGSADIDA
DKLLGQEIGLKISADPGNPDRKRFFHGIVDAFRFDGLDDEGHWLYHLIVRPRLWLLSKTT
DNRIFQEMTVKDIVSAVLDQHGCSDYEWDLRRNPPSRDYCVQYGESDLDFIQRLLEHEGI
FYFFRFGDGKHTLILSDSLETLVPADDCSSLRYRESMADRHTVAGVITQFRRVDSIVSGS
HSLTDYDFTKPSADLTAMVENSKTHSQADGARYSYPGTYTEHARGADLAGLRNHEDQVHA
HVITARSTAPAPASGNVFKLADFPRDRDNIGYAIEQAVYRIRGNRYRARQPDARAFAGRA
LPMDEGMEPEAEGTGFSALYTLVPQETGYCPPRVTRRPVMAGPQTAVVVGPAGEEIYTDE
YSRVKVQFHWDRLGKSDEHSTCFVRVSSVWAGAGWGFIQIPRIGQEVIVDFLEGDPDQPI
ITGRVYNAAQMPPYGLPGSATQSGWKSNSTPGGGGWNELRFEDKKGSEEVYFQAEKDHNE
LVKNNESRHIGNDWSEEVVRDATQWVGHDRTETVDNNKSVTVGVDRTVSIGSNDDETVGK
NRSLTVGVDETIAIGSNSTESIGANHHQSVGSNQTVLVSVARTDRVGAAETRIVGAGRSV
TVGAEQVHAVGRDDIWSIGSDQKVSIGKNRVTDIGESSSLSVAKSSSQSIGEDLAINAGK
TIVIEAADSITLICGSARLQMKKDGTILIDGKDLSGKASGKINLNASGDVIIKGSKISQN
NT seq 2343 nt   +upstreamnt  +downstreamnt
atgccgaccgaacgtttcgccgaactccaatcgcctctgcccggggaagacgcactggaa
tccacgccgatggcggaattctcggggctggccttccacgggatgcagggacgggattcg
ctcagccggtgcttcgaatttgatatcgcggccatcagcggctctgccgatatcgacgcg
gacaaattgctgggtcaggaaatcgggctgaagatatcagccgatcccggcaaccccgac
cgcaagcggttctttcacggcatcgtcgatgccttccgctttgacggtctcgacgacgag
gggcactggctttaccacctgatcgtgcggccccggctttggctgctgagcaagaccacc
gacaaccgcatctttcaggaaatgacggtcaaggacatcgtcagcgcggttctggatcag
cacggatgttccgactatgaatgggatctgcggcgcaatccgccctcgcgcgactattgc
gtccagtatggcgaaagcgatctggatttcattcaacgactgctggaacacgaaggcatc
ttctatttcttccggttcggggacggcaaacacacattgatcctcagcgacagtctggag
acgctggtccccgccgatgactgttcgtcgctgcgctatcgcgaaagcatggcggatcgt
cacaccgtcgcgggcgtgatcacacagttccgccgggtggacagcatcgtatcgggcagc
cacagcctgaccgattacgatttcacgaaaccctcggccgatctgacggccatggtcgaa
aacagcaaaacccacagccaggccgatggcgcgcgatacagctatccggggacctatacc
gaacacgcccggggcgccgatctggccggtctgcgcaatcacgaggatcaggtccacgcc
catgtgatcacggcgcgctcgacggcacccgccccggcgtcgggcaatgtcttcaagctg
gccgattttccgcgggatcgcgacaatatcggctatgccatcgagcaggcggtctatcgc
atccgcggcaaccgctatcgcgcccggcagcctgacgcccgcgcctttgcaggccgggcg
ctgcccatggacgaggggatggagcccgaggccgaaggcacgggattttccgcactttat
accctcgtgccgcaggaaacgggctattgcccgccgcgggtgacgcgcaggccggtcatg
gccgggccgcagaccgccgtcgtggtcggtcccgcgggcgaagagatctataccgacgaa
tacagccgggtgaaggttcagttccactgggaccggctgggcaaatcggacgagcacagc
acctgcttcgtccgggtcagcagcgtgtgggccggggcgggctggggcttcatccagatc
ccgcgcatcgggcaagaggtgatcgtcgattttctggaaggcgaccccgatcagccgatc
atcaccggccgcgtctataacgccgcgcagatgcccccctatggcctgcccggcagcgcc
acgcaatcgggctggaaatcgaactctacccccggcggcggcggctggaacgagttgcgg
ttcgaggacaagaagggcagcgaagaggtctatttccaggccgagaaggaccacaacgaa
ctggtcaagaacaacgaatcccgccacatcggcaatgactggtccgaagaggtggtccgc
gatgcgacccaatgggtcggccatgaccggaccgagacggtcgataacaacaagtcggtg
acggtcggcgtcgatcgcaccgtcagtatcggcagcaatgacgacgaaacggtgggcaag
aaccgttccctgacggtgggcgtggatgagacgattgcgatcggttcgaactctacggaa
agcatcggcgcgaaccaccatcagtctgtgggatcgaaccagaccgtccttgtctcggtg
gcgcgaaccgatcgggtcggcgcggcggaaacacgcatcgtcggggccgggcggtcggtg
acggtcggggccgaacaggtgcatgctgtgggccgcgacgacatctggagcatcgggtcg
gatcagaaggtcagcatcggcaagaaccgcgtgaccgatatcggggaaagcagcagcctg
tcggtcgccaaatccagcagccagagcatcggcgaggatctggccatcaatgccggaaaa
accatcgtcatcgaggccgccgacagcatcacgctgatctgtggaagcgcccgattgcag
atgaagaaggacggtaccatcctgatcgacggcaaggatctgtcgggcaaggcctcgggc
aagatcaacctcaatgcctcgggcgacgtgatcatcaagggcagcaagatcagccagaac
tga

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