KEGG   Paracoccus alcaliphilus: JHW40_22385
Entry
JHW40_22385       CDS       T08960                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
palp  Paracoccus alcaliphilus
Pathway
palp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:palp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JHW40_22385 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:palp02044]
    JHW40_22385 (tssH)
Secretion system [BR:palp02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JHW40_22385 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 AAA_16 ClpB_D2-small AAA_22 Sigma54_activat ATPase_2 AAA_7 nSTAND3 Zeta_toxin Clp_N NACHT AAA_18 TniB NBD_SMAX1 TsaE DUF815 AAA_24 Rad17 Hpr_kinase_C Cyclin_N SLFN-g3_helicase
Other DBs
NCBI-ProteinID: WCR20970
LinkDB
Position
p305818:52723..55476
AA seq 917 aa
MATRGSQQTIKRKELVGKLNPTCLKAFSEAAQAAKRRGNPYVELVHFITALADTQRTDVA
ILLEAAGVDRHRFDGDVLRATDALPHGAGSVEEFSDHIFRAIQEAWNYGSLEFGDDTVRS
AYVLLGALQVPVLEGLLFKISLEFDKIDPAAMAGQLDDLLAGSLERTSTPDATGDKPARP
RPGGKSALDQFATNLTARARDGKMDPVVGRDAEIRQIVDILLRRKQNNPILTGEAGVGKT
AVVEGFAQRLAKGDVPPQLRNVELHMLDIGLMQAGASVKGEFEKRLKSVIEEVQSSDVPI
ILFIDEAHTLIGAGGAAGTGDAANLLKPALARGEMRTIAATTWAEYKQHIEPDPALTRRF
QTVKIEEPDEIRAVLMCRGIAGVLEKHHQVELLDESIEAAVKLSHRYIPSRQLPDKAISL
LDTACARVAVSQHATPAEVEDLERRLSALEIEQGIIEREEAIGIEVEERRTVVETAITAA
KAALDAANERWDAEKAIVAEILDLRAQLRGIGAGLDGTGDLGDVEQAPTEDAEEQPRPET
QSRADDAATEAPVFDRQQALATLKGKMADLTTAQGESPLILPSVDRVAVAAVVQDWTGIP
TGRMLASQTEKALTLARSLAGRVVGQDHAMEMIANRIQTSAAGLKAPEKPVGVFLLCGPS
GVGKTETALALAELMYGGEDNLISINMSEFQEAHTVSTLKGAPPGYVGYGKGGILTEAVR
RRPYSVILLDEVEKAHPDVHEIFFQVFDKGMMDDSEGRRIDFKNTLILLTSNVGSEDIMA
MTADGTAKTDPEELSSALRTPLLRVFPAALLGRVVTIPYYPLSDPMIEAIAGHKLRGIAK
RLGEGYGAQLVIGDGAMQVIKDRCTEIESGGRMIDAILTNTLMPELSRRILTWRLEGRDL
TRVEVSGGKAGFDYHFE
NT seq 2754 nt   +upstreamnt  +downstreamnt
atggccacccgcggatcgcagcaaacgatcaaaagaaaagagcttgtcggcaagctgaat
cccacctgtttgaaggccttttccgaagccgcgcaggcggccaaacgacgcggaaacccc
tatgtcgagctggtgcatttcatcaccgcactggccgatacccagcggacggatgtggcg
atcctgctggaggccgcgggggtggaccggcatcgtttcgatggcgacgtgctgcgcgcc
accgatgcgctgccgcatggtgccggatcggtcgaggaattttccgaccatatcttccgg
gcgattcaggaggcctggaactatggctcgcttgaattcggcgacgatacggtccggtcg
gcctatgtgttgctgggggcgttgcaggtccccgtgctggaggggctgctgttcaagatc
agccttgaatttgacaagatcgatccggccgcgatggcgggacagctggacgatctgctg
gccggctcgctggagcgcacgagcacgcccgacgcgaccggggacaagcccgcccggccc
cggcccggcggcaaatcggcgctggatcagttcgcgaccaacctgacggcacgggcgcgc
gacggcaagatggatcctgtcgtcggtcgcgatgccgaaatccgccagatcgtggacatc
ctgctgcgccgcaagcagaacaacccgatcctgaccggcgaggccggtgtcggcaagacc
gccgttgtcgaaggctttgcacagcgtctggccaagggcgatgttccgccgcaattgcgc
aatgtcgaactgcacatgctggatatcgggctgatgcaggccggggccagcgtgaagggc
gaattcgagaaacgcctgaagtcggtgatcgaagaggtgcagtcctcggacgtgccgatc
attctgttcatcgacgaggcccatacgctgatcggggccggaggggccgcaggcacgggc
gatgccgccaatctgctgaaacctgcgctggcccgaggcgagatgcgcaccatagccgcc
acgacatgggccgaatacaagcagcatatcgaacccgatccggcgttgacgcggcggttc
cagaccgtgaagatcgaggaacccgacgagatcagggcggtgctgatgtgccgcggcatt
gccggggtgctggaaaagcatcatcaggtcgaattgctggacgaaagcattgaggcggcg
gtgaagctgtcgcatcgctatatcccgtcgcgccaactgcccgacaaggcgatcagcctg
ctggataccgcctgcgcgcgggtggcggtatcgcagcacgccacgcccgccgaggtcgag
gatctggagcgcaggctgtcggcgctggaaatcgaacaggggatcatcgaacgcgaggaa
gcgatcggcatcgaagtcgaggaacgcaggaccgtggtcgagaccgcgatcacggccgca
aaggcggcactggacgctgcgaatgaacgctgggatgcggaaaaggccattgtcgcagag
atcctcgaccttcgggcgcagctgcgcgggatcggcgctggactggatggcaccggcgat
ctgggcgatgtcgagcaggcgccgaccgaagatgcggaggaacaaccccgacccgaaacc
cagtcacgcgcagacgacgcggcgaccgaagccccggttttcgaccggcagcaggctctg
gcaacgctgaaagggaaaatggccgatctgacgacggctcagggtgaatcaccgctgatc
ctgccatcggtggaccgggtggcggttgccgccgttgtgcaggactggaccggaatcccg
acgggccggatgctggccagccagacggaaaaggcgctgacattggcccgcagccttgcc
gggcgcgtcgtcgggcaggatcacgcgatggagatgatcgccaaccgcatccagacctcg
gccgccgggctgaaggcgcccgaaaagccggtcggggtgttcctgctgtgcggtccgtcc
ggcgtgggcaagaccgaaaccgcgctggcgctggccgaactgatgtatggcggcgaggac
aacctgatctcgatcaacatgagcgaatttcaggaggcccataccgtcagcacgctgaag
ggcgcgcctccaggctatgtcggctatggcaagggcggcatcctgaccgaggcggtgcgg
cgcaggccctattccgtcatcctgctggacgaggtggaaaaggcccatcccgacgtacac
gagattttctttcaggtcttcgacaaggggatgatggatgacagcgagggccggcgcatt
gatttcaagaacacgctgatcctgctgacctcgaatgtcgggtccgaggacatcatggcg
atgactgccgatggaaccgccaaaaccgaccccgaggaactgagcagcgcactgcggacc
ccgctgctgcgtgtatttcccgccgccctgctgggtcgcgtggtgacgatcccctattat
ccgctgtccgacccgatgatagaggcgatcgccggacacaaattgcgcggcatcgcgaaa
cggcttggcgaaggctatggtgcccaactggtgatcggcgacggcgcgatgcaggtcatc
aaggatcgttgcaccgagatcgaaagcggcggtcggatgatcgatgcgatcctgaccaac
acgctaatgcccgaactgagccggcgcatcctgacctggcggctggagggccgggatctg
acccgggtggaagtgtccgggggaaaggccggtttcgattaccatttcgaatag

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