Pseudonocardia alni: PaSha_01945
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Entry
PaSha_01945 CDS
T11230
Name
(GenBank) winged helix-turn-helix transcriptional regulator
KO
K22298
ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
Organism
palq Pseudonocardia alni
Brite
KEGG Orthology (KO) [BR:
palq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palq03000
]
PaSha_01945
Transcription factors [BR:
palq03000
]
Prokaryotic type
Helix-turn-helix
ArsR family
PaSha_01945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_5
HTH_20
MarR_2
PaaX
DUF7343
HxlR
SoFic-like_C
HTH_24
HTH_34
HTH_CodY
HTH_Crp_2
TrmB
KORA
Motif
Other DBs
NCBI-ProteinID:
WFG42423
LinkDB
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Position
406662..407039
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AA seq
125 aa
AA seq
DB search
MSAAAQTTHAPGAGPGADDDHHPAPEPGPTRDPRTLAAAGDLLRALAAPVRIAIVLQLLE
HSRCVHDLVDALGVTQPLISQHLRVLKAAGVVEGERKGREVLYSLVDDHLAHIVVDAVAH
VEEDT
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgcagcccagaccacgcacgcaccgggagccggcccgggtgcggacgacgac
caccaccccgcgcccgagcccggcccgacccgcgacccgcgcaccctggccgccgcgggc
gacctgctgcgggcactcgccgcaccggtccggatcgccatcgtcctgcagctgctggaa
cactcccggtgcgtgcacgacctggtggacgcgctcggggtcacccagcccctgatcagc
cagcacctgcgggtcctcaaggccgccggggtggtcgagggcgagcggaagggccgtgag
gtgctgtactcgctggtggacgaccacctggcacacatcgtggtggacgccgtcgcccac
gtcgaggaggacacgtga
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