Pseudonocardia alni: PaSha_02960
Help
Entry
PaSha_02960 CDS
T11230
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
palq Pseudonocardia alni
Brite
KEGG Orthology (KO) [BR:
palq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palq03016
]
PaSha_02960 (truB)
Enzymes [BR:
palq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PaSha_02960 (truB)
Transfer RNA biogenesis [BR:
palq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PaSha_02960 (truB)
Prokaryotic type
PaSha_02960 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
WFG42585
LinkDB
All DBs
Position
complement(610222..611118)
Genome browser
AA seq
298 aa
AA seq
DB search
MPARNPPPPPGLVIVDKDRGPTSHDVVGKLRRIMGTRKVGHAGTLDPMATGVLVVGIERA
TKLLGHLSLDTKAYTATVRLGQATDTDDAEGTPVGEPVPVDADDAALRTAMAALTGGIMQ
VPSAVSAVRIDGKRAYQRVRDGETVEIPARPVTVSAFELLAVRREGPWCDLDVAVDCSSG
TYVRALARDLGAALGSAGHLTALRRTRVGPFTLEHARTVEQLADDPGLSLDLAAAVATAF
PRVDLDASAATDVRFGKSLPAAGIEGTYGVFAPDGAALALMADRGAAARPVVVLAPAG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgcacgcaacccgcccccgccgcccggactcgtgatcgtcgacaaggaccggggc
ccgaccagtcacgacgtcgtcgggaagctccgccggatcatgggcacccgcaaggtcggc
cacgccgggacgctggacccgatggcgaccggggtgctggtcgtcggcatcgagcgggcc
accaagctgctcgggcacctgtcgctggacaccaaggcctacaccgccaccgtgcgcctc
gggcaggccaccgacaccgacgacgccgagggcacgcccgtcggcgagcccgtcccggtc
gatgccgacgacgccgctctccggaccgcgatggccgcgctgacgggcgggatcatgcag
gtccccagcgcggtctccgcggtcaggatcgacgggaagcgcgcctaccagcgggtccgc
gacggcgagaccgtcgagatcccggcccgcccggtcaccgtgtccgccttcgagctgctc
gcggtgcgccgcgaggggccgtggtgcgacctggacgtcgccgtcgactgctcctcgggc
acctacgtccgcgcgctcgcccgcgacctcggcgccgcgctgggctccgccggccacctg
accgcgctgcgacgcacccgggtcggaccgttcaccctggagcacgcgcgcaccgtcgag
cagctcgccgacgacccgggtctgtcgctggacctcgccgcggccgtcgcgacggcgttc
ccccgcgtcgacctcgacgcgtccgccgccaccgacgtgcggttcggcaagtcgctgccc
gcggccgggatcgagggcacctacggcgtgttcgccccggacggcgccgcgttggccctg
atggccgaccgcggcgccgccgcccgcccggtcgtcgtgctcgccccggccggctga
DBGET
integrated database retrieval system
