Pseudonocardia alni: PaSha_05690
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Entry
PaSha_05690 CDS
T11230
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
palq Pseudonocardia alni
Pathway
palq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
palq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PaSha_05690 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palq03400
]
PaSha_05690 (xth)
Enzymes [BR:
palq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PaSha_05690 (xth)
DNA repair and recombination proteins [BR:
palq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PaSha_05690 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
DUF2267
Motif
Other DBs
NCBI-ProteinID:
WFG43024
LinkDB
All DBs
Position
complement(1176997..1177860)
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AA seq
287 aa
AA seq
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MRLATWNVNSAKSRLPRLLPWLDEREPDVVCLQETKLSDDDFAAAFDEALAERGYASAHH
GQGRWNGVALLSRVGLDDVVRGLPDEPVFTEGGLEVPDARAVTATCGGLRVTSVYVPNGR
SPEDPHYAYKLRWLGALRELVATGDPASTVVAGDVNIAPTDDDVWDRSLFDGATHVTPDE
RAALAALLGTGLRDVLRERWPDERVFSYWDYRAGRFHQDQGMRIDLVLAGSGPADRRAAV
WVDRKARKGKLPSDHAPVVLDLDEAPDGDVGPVVPPPSAPAPLSRRR
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtctggccacctggaacgtgaactccgcgaagtcccggctgccgcggctgctgccg
tggctcgacgagcgggaacccgacgtcgtctgcctccaggagaccaagctctccgacgac
gacttcgccgcggcgttcgacgaggccctggccgagcgcggctacgcgagcgcgcaccac
ggccagggccggtggaacggggtcgccctgctgtcgcgggtgggtctggacgacgtcgtg
cgcggcctgcccgacgagcccgtcttcaccgagggcgggctggaggtcccggacgcgcgt
gccgtcaccgccacctgcggcgggctgcgggtcacctcggtgtacgtccccaacggccgc
agcccggaggacccgcactacgcctacaagctgcgctggctcggtgcgctgcgcgagctg
gtcgcgacgggcgaccccgcgtcgaccgtggtggccggggacgtgaacatcgcccccacc
gacgacgacgtctgggaccgttccctgttcgacggcgccacccacgtcacccccgacgag
cgggccgcgctcgccgcgctgctcgggaccgggctgcgcgacgtcctgcgcgagcgctgg
cccgacgagcgcgtgttcagctactgggactaccgggccggccggttccaccaggaccag
gggatgcggatcgacctggtgctggccgggtcgggcccggccgaccgtcgcgcggcggtg
tgggtggaccgcaaggcgcgcaaggggaagctccccagcgaccacgccccggtcgtcctg
gacctcgacgaggcacccgacggcgacgtcggcccggtcgtcccgccgccgtcggccccg
gcaccgctcagccgtcggcgataa
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