Pseudonocardia alni: PaSha_07745
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Entry
PaSha_07745 CDS
T11230
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
palq Pseudonocardia alni
Brite
KEGG Orthology (KO) [BR:
palq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palq03000
]
PaSha_07745
Transcription factors [BR:
palq03000
]
Prokaryotic type
Helix-turn-helix
Other families
PaSha_07745
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
GAF
Sigma54_activ_2
HTH_50
HTH_30
HTH_29
Phage_NinH
Sigma54_activat
HTH_28
AAA_16
HTH_17
HTH_22
HTH_23
ABC_tran
HTH_7
HTH_3
TsaE
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WFG46611
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Position
1583199..1584935
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AA seq
578 aa
AA seq
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MREDAVRPPILASWIRSRDSDVAPDSIDLPEIGRETDSPLMRAATPIVSELCDQFATEPV
SLILCDGDGVVLDRRTGDSALRQHLDRVWLVPGFSYAEQHVGTNGIGTALEGRRPTEVFG
HEHFVEHLEDLACAGAPIRHPVTGKILGVVDLTCWRSEANALMVATAATTARRIEEALLA
ASGRHELTLLHDYLTAVQRGGDSAVLAVGDDLVMMNDRARELIAPGDQVPLLAGAADALR
AGRNRQLVVDLPSGATARVQCRPSWNESGSAGGILQVSLTHRETVGRGSATPTITTALPT
AVGSGALWTKCAQAVDRHFRTNEWLVLQGEHGSGRTTLARATHHLHSPAGHVRVLDAGDV
GPRWLSEVSDELDGGGGTLVLREVDRLPPAAAAALADVLEPHRESTDPERAWVIATRGSS
RTTDSPELASLLDCFPRTIEVPPLRHHVEDVAELVPYLLARLTRGADLTCAPEALRVLMR
HRWPGNVEQLYQVLRKVVSRRRTGVIRLEDLPPETRVLARRVLTPLESIECDAIVDALLD
ADGNKAEAARRLGMSRATIYRKIRGYGIATPEGAGMSR
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaggacgcggtgcgcccgccgatcctggcgtcctggatccggtcgcgggacagc
gacgtcgcgcccgactccatcgacctgcccgagatcggccgcgagaccgacagcccgctg
atgcgggcggccacgccgatcgtctccgagctgtgcgaccagttcgccaccgagccggtc
agcctcatcctctgcgacggcgacggtgtcgtcctcgaccgccggaccggtgactccgcg
ctgcgtcagcacctggaccgggtgtggctcgtccccggtttctcctacgccgagcagcac
gtcggcaccaacggcatcggcaccgcgctggagggcaggcgtccgaccgaggtgttcggg
cacgagcacttcgtcgagcacctggaggacctggcctgcgccggcgccccgatccggcac
ccggtcaccggcaagatcctgggcgtcgtcgacctgacgtgctggcggagcgaggccaac
gcgctgatggtcgccaccgccgcgaccacggcccgccggatcgaggaggcgctgctcgcc
gcgtccgggcggcacgagctgacgctgctgcacgactacctgaccgcggtccagcgcggg
ggcgactccgcggtgctcgccgtcggcgacgacctcgtgatgatgaacgaccgcgcccgc
gagctcatcgcacccggcgaccaggtcccgctgctggccggggcggccgacgcgctgcgg
gccgggcgcaaccgccagctcgtcgtcgacctgccgagcggggcgaccgcccgcgtgcag
tgccggccgagctggaacgagtcgggctcggcgggcggcatcctgcaggtgagcctgacc
caccgcgagaccgtcggccgcggctccgcgaccccgacgatcaccaccgcgctgccgacc
gccgtcggctcgggggcgctgtggaccaagtgcgcccaggcggtggaccggcacttccgc
accaacgagtggctcgtgctgcagggcgagcacggctccggccggaccacgctggcccgc
gccacccaccacctccactcccccgccgggcacgtccgtgtgctcgacgcgggcgacgtg
ggcccgcgctggctctccgaggtgtccgacgagctcgacggcggcggcgggacgctggtg
ctgcgcgaggtcgaccggctccccccggccgccgcggcggcgctcgccgacgtgctcgag
ccgcaccgcgagtcgaccgacccggagcgtgcgtgggtcatcgcgacccgcggcagctcc
cggacgaccgactcgcccgagctggcgtcgctgctggactgcttcccgcgcaccatcgag
gtcccgccgctgcgccaccacgtggaggacgtcgccgagctcgtgccctacctgctcgcc
cggctgacccgcggcgccgacctgacctgcgcgccggaggccctgcgggtgctcatgcgg
caccggtggccgggcaacgtcgagcagctctaccaggtgctgcgcaaggtcgtgagccgt
cgccggaccggggtgatccggctggaggacctgccgccggagacgcgggtgctggcccgg
cgggtgctgaccccgctggagtcgatcgagtgcgacgccatcgtcgacgccctgctcgac
gccgacggcaacaaggccgaggccgcgcgccggctcgggatgagccgggccacgatctac
cgcaagatccgcggctacggcatcgcgacgccggagggggcggggatgtcccggtag
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