Pseudonocardia alni: PaSha_08825
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Entry
PaSha_08825 CDS
T11230
Name
(GenBank) DEAD/DEAH box helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
palq Pseudonocardia alni
Brite
KEGG Orthology (KO) [BR:
palq00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
PaSha_08825
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Motif
Pfam:
DEAD
MZB
WHD_HRQ1
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
WFG46634
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Position
complement(1800362..1802626)
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AA seq
754 aa
AA seq
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MRHVVRIPARAGNPVDWPGWTPEPLRTAWAARGVTRPWSHQAQGAELVHSGADVVVATGT
ASGKSLVYQLPVLAGLAEDPRATALYLAPTKALAADQLRSLDGLAPDGVRPAAFDGDTPM
DQRDWVRRHCRWVFSNPDMLHRSILPRHGRWTTFLRRLRYVVVDECHTYRGVFGSHVALL
LRRLLRLAARYGARPVIVLASATVARPEEFASRLTGRGVVAVTEDGSPHAGRTVAFWEPP
LLAEITGENGAPVRRSAGAEVARMLADLVLTDARTLAFVRSRRAAELTALGAKRQVAEIA
PELAARVAAYRGGYLPEERRALEADLMSGELLGVATTNALELGVDISGLDAVVQAGFPGT
RASFWQQAGRAGRAADEALVVLVARDDPLDTYLVHHPRSLIGAPVESCVLNPVNPYVLAP
QLACAAAEMPLTTVDVEEIFGGAPAVEVLDALVDEGVLRRRPHGWFWPDTGDAPAAHVDI
RGSGLGQVAVVEAATGRMLGTVDGGSAPGTIHSGAVYLHRGDSFVVDELDLDDGVALVHA
EDPDWRTEAQSVSDVTVLEVMEHRRYGPVQVCFGATTVTSQVVAYRRRTPDGTVLDQTAL
DLPPQSLDTRSVWYTIDPDALADAAIDEARLPGALHAAEHAAIGLLPLFAICDRWDIGGL
STALHPDTGLPTVFVHDGHPGGAGLAERGHEVLGRWLAATRAAVRDCECRTGCPSCVQSP
KCGNGNNPLDKTGAVQVLDLVLAALEGGAPTGSR
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
ctgcggcacgtcgtgcggatcccggcgcgggccgggaacccggtcgactggccgggctgg
acgcccgagccgctgcgcacggcctgggcggcccgcggcgtgacccgcccgtggtcgcac
caggcgcagggtgcggagctggtgcactccggcgccgacgtcgtcgtcgcgacggggacg
gcgtcggggaagtcgctggtctaccagctgccggtgctcgccgggctggccgaggacccg
cgggccacggcgctgtacctcgccccgaccaaggcactcgcggccgaccagctgcggtcc
ctcgacgggctcgccccggacggtgtccggcccgccgcgttcgacggcgacactcccatg
gaccagcgtgactgggtccgcaggcactgccggtgggtgttctccaacccggacatgctg
caccggtcgatccttccccggcacggacgctggacgaccttcctccgccggctgcgctac
gtcgtggtcgacgagtgccacacctaccggggggtgttcggctcgcacgtggcgctgctg
ctgcgccggctgctgcgcctcgccgcgcgctacggcgcgcgtcccgtgatcgtgctcgcg
tcggcgacggtggcgcgcccggaggagttcgcgtcccggctgaccggacgcggcgtcgtc
gccgtcaccgaggacgggtccccgcacgccgggcgcaccgtcgcgttctgggagccgccg
ctgctcgccgagatcaccggggagaacggggcgccggtccgccgctcggccggggccgag
gtcgcccggatgctcgccgacctcgtcctgaccgacgcccgcaccctggcgttcgtccgg
tcccggcgggccgccgagctcaccgcgctcggtgcgaagcgccaggtcgccgagatcgct
ccggagctggccgcgcgggtggccgcctaccgcggcggctatctgcccgaggagcgccgt
gcgctggaggccgacctgatgtcgggcgagctgctcggggtcgcgaccaccaacgcgctc
gagctcggcgtcgacatctccgggctcgacgccgtggtgcaggccgggttcccgggcacc
cgcgcgtcgttctggcagcaggccgggcgcgccggacgggccgccgacgaggcgctcgtc
gtgctcgtcgcccgcgacgacccgctcgacacctacctcgtgcaccacccgcgctcgctg
atcggggcgcccgtggagagctgcgtgctcaatccggtcaacccgtacgtgctcgcgccg
cagctggcgtgcgcggccgcggagatgccactgaccacggtcgacgtcgaggagatcttc
gggggagcccccgcggtggaggtcctcgacgccctggtcgacgagggcgtgctgcgccga
cgaccgcacggctggttctggcccgacaccggcgacgcacccgccgcgcacgtcgacatc
cggggctccgggctcgggcaggtcgccgtggtggaggcggcgaccgggcggatgctcggc
accgtcgacggcggctcggccccgggcacgatccactccggtgcggtgtacctgcaccgc
ggcgacagtttcgtcgtcgacgagctcgacctcgacgacggcgtcgcgctcgtccacgcc
gaggacccggactggcgcaccgaggcccagtcggtctccgacgtcaccgtgctcgaggtg
atggagcaccgccggtacggaccggtgcaggtctgcttcggcgcgaccacggtgaccagc
caggtcgtcgcctaccggcgacgcaccccggacgggacggtgctcgaccagacggcgctg
gacctgccgccgcagagcctggacacccgctcggtctggtacacgatcgaccccgacgcg
ctcgccgacgccgccatcgacgaggcacgcctccccggcgcactgcacgccgccgagcac
gccgcgatcggtctgctcccgctgttcgcgatctgcgaccgctgggacatcggcggcctg
tccaccgcgctgcaccccgacaccgggctcccgacggtgttcgtgcacgacgggcacccg
ggcggcgcgggcctggccgaacgcggccacgaggtgctggggcggtggctggcggcgacc
cgcgccgcggtccgggactgtgagtgccgcacgggctgcccgtcctgcgtgcagtccccg
aagtgcggcaacggcaacaacccgctggacaagacgggggcggtgcaggtgctggacctg
gtcctcgccgcgctggaaggcggtgccccgaccggttcgcgatga
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