Pseudonocardia alni: PaSha_10920
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Entry
PaSha_10920 CDS
T11230
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
palq Pseudonocardia alni
Pathway
palq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
palq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PaSha_10920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palq03400
]
PaSha_10920
Enzymes [BR:
palq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
PaSha_10920
DNA repair and recombination proteins [BR:
palq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PaSha_10920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
WFG43865
LinkDB
All DBs
Position
complement(2212652..2213419)
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AA seq
255 aa
AA seq
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MQIGAHVRDAEDPLAAAAEVGAEVIQLFLSDPQGWKKPPPHPRAAELAASDVAVVVHAPY
TANVASTNNRIRIPSRKIVQQHLAGAAEVGAFGLVVHGGHVTKDDDPAVGIDNWRKFVER
QAGEHGFDVPVLIENTAGGDNAMARRFDALGRLWDAVGEFGVGFCLDTCHAFAGGEELAG
IVERVRGITGRIDLIHLNNSRDAFDSARDRHANIDDGTIPPDELAAVVAAAGAPVVVETP
PEGQARDIAFLREHT
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcggagcacacgtccgcgacgccgaggaccctctggccgcggccgccgaggtc
ggcgccgaggtgatccagctgttcctgtccgacccgcagggctggaagaagccgccgccg
cacccacgggcggcggagctggccgcgtcggacgtcgcggtggtggtgcacgcgccctac
accgcgaacgtcgcgtccacgaacaaccggatccgcatcccgagccgcaagatcgtgcag
cagcacctggccggggccgccgaggtcggcgcgttcggcctggtcgtgcacggcggccac
gtcacgaaggacgacgacccggccgtcgggatcgacaactggcgcaagttcgtcgagcgc
caggccggggagcacggcttcgacgtgcccgtcctgatcgagaacaccgcgggcggggac
aacgccatggcccgccggttcgacgcgctgggccggctgtgggacgcggtgggcgagttc
ggcgtcgggttctgcctggacacctgtcacgccttcgccggcggcgaggagctggccggg
atcgtcgagcgggtccgggggatcaccgggcggatcgacctgatccacctgaacaactcg
cgcgacgcgttcgactccgcccgcgaccggcacgccaacatcgacgacgggacgatcccg
ccggacgagctggccgccgtcgtcgcggcggcgggggcaccggtcgtggtggagaccccg
cccgaggggcaggcccgcgacatcgcgttcctgcgcgagcacacctga
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