Pseudonocardia alni: PaSha_12440
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Entry
PaSha_12440 CDS
T11230
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
palq Pseudonocardia alni
Brite
KEGG Orthology (KO) [BR:
palq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
palq03110
]
PaSha_12440
Chaperones and folding catalysts [BR:
palq03110
]
Heat shock proteins
HSP100
PaSha_12440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
TniB
UVR
ATPase_2
AAA_14
nSTAND3
RsgA_GTPase
bpMoxR
DNA_pol3_delta2
AAA_24
NACHT
NBD_SMAX1
AAA_23
Motif
Other DBs
NCBI-ProteinID:
WFG44113
LinkDB
All DBs
Position
2516410..2518953
Genome browser
AA seq
847 aa
AA seq
DB search
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVR
QQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA
AQVLVKLGADLNRVRQQVLQLLSGYQGKEPQESGTGGRGEGTPSSSLVLDQFGRNLTQQA
REGKLDPVIGREKEIERIMQVLSRRTKNNPVLIGEAGVGKTAAVEGLGQAIVKGEVPETL
KDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAI
DAASILKPMLARGELQTIGATTLDEYRKYVEKDPALERRFQPIQVSEPSVEHTIEILRGL
RDRYEAHHRVTITDDALASAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLR
EFDEKIANVRRDKESAIDAQDFERAAHLRDQEKTLLGEKAEREKQWKSGDLDVVAEVDGE
QIAEVLGNWTGIPVFKLTEEETTRLLKMEDEVHKRIIGQEDAVRSVSQAIRRTRAGLKDP
KRPSGSFIFAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYV
GYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVL
IFTSNLGTQDISKAVGLGFSSGGDEKSNYERMKTKVNDELKKHFRPEFLNRIDDIIVFHQ
LNQEQIIQMVDLMIGRVEKQLANKDMGIELTDNAKKLLAHRGFDPVLGARPLRRTIQREI
EDQLSEKILFGEIEAGQIVIVDVEGLDTSAEEGSNAWSDKAKFTFRGERKPSEPVPDSPP
TALAGEE
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
ttgttcgagaggttcaccgaccgagcgcgacgtgttgtcgtcctggcccaggaagaggcc
cggatgctcaaccacaactacatcgggaccgagcacatcctccttggcctgatccacgag
ggagagggcgtcgccgcgaaggcgctcgagtccctcggtatcgctctggagggcgtgcga
cagcaggtcgaggagatcatcggccaggggcagcaggccccgtccgggcacatccccttc
accccccgggcgaagaaggtgctggagctgtcgctgcgcgaggcgctgcagctcggccac
aactacatcgggaccgagcacatcctgctcggcctcatccgcgagggcgagggcgtcgcg
gcccaggtgctggtcaagctgggcgccgacctcaaccgtgtccgtcagcaggtgctccag
ctgctgtccggctaccagggcaaggagccgcaggagagcggcaccggtggccgtggcgag
ggcacgccgtcctcgtcgctggtgctggaccagttcggtcgcaacctcacccagcaggcc
cgtgagggcaagctggacccggtcatcggccgggagaaggagatcgagcggatcatgcag
gtcctctcgcggaggaccaagaacaacccggtgctgatcggcgaggccggcgtcggcaag
accgccgccgtcgagggcctcggccaggcgatcgtcaagggcgaggtcccggagacgctg
aaggacaagcagctctacaccctcgacctgggctcgctggtcgccggttcccgctaccgc
ggtgacttcgaggagcgcctcaagaaggtgctcaaggagatccgcacccgcggcgacatc
atcctgttcatcgacgagatccacaccctggtgggtgcgggtgccgccgagggcgcgatc
gacgccgcctcgatcctcaagccgatgctggcccgcggcgagctgcagaccatcggtgcg
acgacgctcgacgagtaccgcaagtacgtcgagaaggaccccgcgctggagcgccgcttc
cagccgatccaggtgtccgagccgtcggtcgagcacacgatcgagatccttcgtggtctg
cgtgaccggtacgaggcgcaccaccgcgtcacgatcaccgacgacgcactggcctcggcc
gcgacgctggccgaccgctacatcaacgaccgcttcctgccggacaaggcgatcgacctg
atcgacgaggccggcgcccggatgcgcatccgccggatgacggctccgccggacctgcgg
gagttcgacgagaagatcgcgaacgtccgccgggacaaggagtcggcgatcgacgcgcag
gacttcgagcgggccgcgcacctgcgcgaccaggagaagaccctgctcggcgagaaggcc
gagcgcgagaagcagtggaagtcgggcgacctcgacgtcgtcgcggaggtcgacggcgag
cagatcgccgaggtgctggggaactggaccggcatcccggtgttcaagctgaccgaggag
gagacgacccgtctgctcaagatggaggacgaggtccacaagcggatcatcggccaggag
gacgccgtccgctccgtctcgcaggcgatccgtcgtacccgcgccggtctgaaggatccg
aagcgcccgtccggctcgttcatcttcgccggcccgtccggtgtcggtaagaccgagctg
tccaaggcgctcgcgaacttcctgttcggcgaggacgacgccctcatccagatcgacatg
ggtgagttccacgaccgctacaccgcctcgcggctgttcggtgcccctcccgggtacgtc
ggctacgaggagggcggccagctcaccgagaaggtgcggcgcaagccgttctcggtggtg
ctgttcgacgagatcgagaaggcgcaccaggagatctacaacacgctcctgcaggtgctc
gaggacggccgtctcaccgacggtcagggccgcacggtcgacttcaagaacaccgtgctg
atcttcacctcgaacctgggcacccaggacatctcgaaggccgtgggactgggattctcc
tccggtggcgacgagaagtcgaactacgagcggatgaagacgaaggtcaacgacgagctg
aagaagcacttcaggccggagttcctcaaccgcatcgacgacatcatcgtcttccaccag
ctcaaccaggaacagatcatccagatggtcgacctgatgatcgggcgggtggagaagcag
ctggcgaacaaggacatgggcatcgagctcaccgacaacgccaagaagctgctggcccac
cgcgggttcgacccggtcctgggcgcccggccgctgcgccggacgatccagcgggagatc
gaggaccagctgtcggagaagatcctgttcggcgagatcgaggccgggcagatcgtcatc
gtcgacgtcgagggcctcgacacctccgcggaggagggctccaacgcctggtcggacaag
gccaagttcaccttccgtggtgagcgcaagccgtccgagccggtgccggactccccgccc
accgcgctggccggcgaggagtga
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