Pseudonocardia alni: PaSha_16535
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Entry
PaSha_16535 CDS
T11230
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
palq Pseudonocardia alni
Pathway
palq00260
Glycine, serine and threonine metabolism
palq00460
Cyanoamino acid metabolism
palq00630
Glyoxylate and dicarboxylate metabolism
palq00670
One carbon pool by folate
palq00680
Methane metabolism
palq01100
Metabolic pathways
palq01110
Biosynthesis of secondary metabolites
palq01120
Microbial metabolism in diverse environments
palq01200
Carbon metabolism
palq01230
Biosynthesis of amino acids
palq01240
Biosynthesis of cofactors
palq04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
palq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PaSha_16535
09102 Energy metabolism
00680 Methane metabolism
PaSha_16535
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PaSha_16535
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PaSha_16535
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PaSha_16535
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PaSha_16535
Enzymes [BR:
palq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PaSha_16535
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
WFG44800
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Position
3347480..3348763
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AA seq
427 aa
AA seq
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MSEQTFWGPDFHALQQQDPEIAGVVLDELERLRGGLQLIASENLTSPAVLAALGSTLSNK
YAEGYPGRRYYGGCGVVDVAENIGNARTKELFGAEHANLQPHSGASANLAAYAAFAKPGD
TVLAMDLKQGGHLTHGSKVNFSGLWFNAVSYTVREDTEVIDYDQVRDLAKQHQPKIIIAG
ATAYPRLIDFAVFREIADEVGAKLMVDAAHFIGLVAGKAIPSPVPYADVVTATTHKVLRG
PRGGMVLCREEHAKAIDKAVFPFSQGGPLMHAVAAKAVAMKEAAQPEYQAYARQVIANAQ
ALTTSLESEGMRAVSGGTDNHLALLDLRPIGVTGSEAETRCDRAGITLNKNAIPYDPAPP
MKPSGIRVGSPSVTTQGMTEADMAEVGALLARAVKAEHDTTAGDAELADVAKAVTALVSK
APAYPRG
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagcagaccttctggggaccggacttccacgcactgcagcagcaggaccccgag
atcgcgggcgtcgtgctggacgagctcgagcgcctgcgcggcggactgcagctcatcgcg
agcgagaacctgaccagccccgcggtgctggcggcgctcgggtcgacgctgtcgaacaag
tacgccgagggctaccccggccgccgctactacgggggctgcggcgtcgtcgacgtcgcg
gagaacatcggcaacgcgcgcacgaaggagctcttcggcgccgagcacgccaacctccag
ccgcactccggcgcgagcgcgaacctcgccgcctacgccgcgttcgccaagcccggcgac
accgtgctggccatggacctcaagcagggcggccacctcacgcacggcagcaaggtcaac
ttctccggcctgtggttcaacgcggtgtcctacacggtccgcgaggacaccgaggtcatc
gactacgaccaggtccgggacctggccaagcagcaccagccgaagatcatcatcgccggt
gcgaccgcgtatccgcgcctgatcgacttcgcggtgttccgcgagatcgccgacgaggtc
ggcgccaagctcatggtcgacgccgcgcacttcatcggcctggtcgccggcaaggcgatc
ccgtcgccggtgccctacgccgacgtcgtcaccgccaccacgcacaaggtcctgcgcggc
ccgcgcggcggcatggtgctgtgccgcgaggagcacgccaaggccatcgacaaggcggtc
ttcccgttctcccaggggggcccgctgatgcacgcggtcgccgcgaaggccgtcgcgatg
aaggaggcggcgcagccggagtaccaggcctacgcccgccaggtcatcgcgaacgcccag
gcgctgacgacgagcctggagtccgagggcatgcgcgccgtctccggcggcaccgacaac
cacctcgcgctgctggacctgcgtccgatcggcgtcaccggctcggaggcggagacccgc
tgcgaccgcgccggcatcacgctgaacaagaacgccatcccctacgacccggcgccgccg
atgaagccgtccggcatccgggtcggctcgcccagcgtcaccacgcaggggatgaccgag
gccgacatggccgaggtcggcgcgctgctggcccgcgcggtcaaggccgagcacgacacc
acggccggcgacgccgagctcgccgacgtcgcgaaggcggtcaccgcgctcgtctcgaag
gcaccggcctaccctcgggggtga
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