Pseudonocardia alni: PaSha_17355
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Entry
PaSha_17355 CDS
T11230
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
palq Pseudonocardia alni
Pathway
palq00300
Lysine biosynthesis
palq00470
D-Amino acid metabolism
palq01100
Metabolic pathways
palq01110
Biosynthesis of secondary metabolites
palq01120
Microbial metabolism in diverse environments
palq01230
Biosynthesis of amino acids
Module
palq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
palq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PaSha_17355
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PaSha_17355
Enzymes [BR:
palq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PaSha_17355
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WFG44935
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All DBs
Position
complement(3525400..3526638)
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AA seq
412 aa
AA seq
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MTAGARAVHPTVATFPVSDRSLIVGGLPVERLAERVGSTPFFAYDRSKITERVRLVRRLL
PVGIELNYAVKANPMVAVVQHMSSLVDGLDVASANEMRRALDTTTPPGKVGFAGPGKSWA
ELTQAVAAGVTIEVESETEAQRVVQVGQTVGVRPHVAVRVNPDFAVKGSGMRLGGGPQQF
GIDSEQVPELLRKMSSWDLDFVGFHIFAGSQNLHAEILCDAQRRTVDLALQIARDADVPL
RHLNVGGGFGVPYFANDEPLDLARIGENLHLQQERVRAEFPGVRMVVELGRYLVGEAGVY
VTRVLDRKRSRGRTFVVVDGGMHHQLAASGNLGQVIRRDYPIAIGNRMDSPDLEPCTVVG
RLCTPLDLLAQNSELPPCDVGDLVVVFLAGAYGKTASPTDFLSHPEPVEVLI
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccggcgcccgtgcggtgcacccgaccgtggcgacgttcccggtgtcggacaga
tcgttgatcgtgggcgggttgcccgtcgagcggctcgccgaacgcgtgggcagcaccccc
ttcttcgcctacgatcgatccaagatcaccgagcgggtccggctcgtccgccgactcctc
ccggtcgggatcgagctcaactacgccgtcaaggcgaacccgatggtcgccgtggtgcag
cacatgagctctctcgtggatggactcgatgtggcgtcggccaacgagatgcgacgtgcg
ctcgacaccacgacaccccccgggaaggtggggttcgccgggcctgggaagtcgtgggcg
gagctcacgcaggccgtggccgccggcgtcacgatcgaggtggagtcggagaccgaagcg
cagcgggtcgtccaggtcgggcagaccgtcggcgtgcgcccgcacgtggcggtacgggtg
aatcccgacttcgcggtcaagggttcgggaatgcggctcggtggcgggccacagcagttc
gggatcgactccgagcaggtccccgagctgcttcgcaagatgagctcctgggacctggac
ttcgtcggattccacatcttcgccggatcgcagaacctccatgcagagatcctctgcgac
gcccagcgacgaacggtcgatctcgccctgcagatcgcgcgggatgcggacgtgccgctc
cgccacctcaacgtcggtggagggttcggtgtcccgtacttcgcgaacgacgagccgctc
gacctcgcccggatcggcgagaacctgcacctccagcaggagcgcgtccgcgccgagttc
ccgggcgtcaggatggtcgtcgagctcggccggtacctcgtcggagaagccggcgtctac
gtgacccgggtactcgaccgcaaacgatcccggggtcgcaccttcgtcgtggtcgacggt
ggaatgcaccatcagctggccgcatcgggaaacctcggtcaggtcatcagacgcgactac
ccgatcgcgatcgggaaccgcatggattcccccgacctcgaaccgtgcaccgtggtcggg
cggctatgcaccccgctcgacctgttggcccagaactccgaactcccgccctgcgacgtc
ggggacctggtggtggtcttcctggccggcgcctacgggaagacggcgagcccgaccgat
ttcctcagccacccggaaccagtggaggtcctgatatga
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