KEGG   Pseudonocardia alni: PaSha_18475
Entry
PaSha_18475       CDS       T11230                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
palq  Pseudonocardia alni
Pathway
palq00300  Lysine biosynthesis
palq00470  D-Amino acid metabolism
palq01100  Metabolic pathways
palq01110  Biosynthesis of secondary metabolites
palq01120  Microbial metabolism in diverse environments
palq01230  Biosynthesis of amino acids
Module
palq_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:palq00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PaSha_18475
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PaSha_18475
Enzymes [BR:palq01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     PaSha_18475
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: WFG45108
LinkDB
Position
3744354..3745223
AA seq 289 aa
MTGGIAFSKGHGTQNDFVVLPDPDAALDLTPARVAALCDRRRGLGADGVLRVVRWAKLAG
EPGVGEPADGVEWFMDYRNADGSLAEMCGNGLRVFARYLHERGWATGGPVGTRNGVLDTA
VGPDGVSVGLGTVGVGPASVATSGDARVDGIALDVGNPHLACVTAADPDTLDLTRAPSFD
PALFPNGVNVEFLTPLDGPADGGRIRMRVYERGVGETRSCGTGTVAAAVAALRHAGHSAG
DVQVTVPGGLLRVTVEAGTDDRTGPTTLHGPAVLLASGELDRAWWDAPA
NT seq 870 nt   +upstreamnt  +downstreamnt
atgaccggcggcatcgcgttcagcaaggggcacggcacgcagaacgacttcgtggtgctg
cccgacccggacgccgcgctcgacctcaccccggcgcgcgtcgccgccctgtgcgaccgc
cgccgcggcctcggcgcggacggggtgctgcgggtcgtgcgctgggcgaagctcgccggg
gagcccggcgtcggtgagcccgccgacggcgtcgagtggttcatggactaccgcaacgcc
gacggctcgctcgccgagatgtgcggcaacggcctgcgcgtgttcgcccgctacctgcac
gagcgcggctgggccaccggcgggccggtcggcacccgcaacggggtgctcgacaccgcg
gtcgggccggacggggtctcggtcgggctcggcacggtcggcgtcggcccggcgtcggtc
gccaccagcggcgacgcgcgtgtcgacggcatcgccctcgacgtcggcaacccgcacctg
gcctgcgtcaccgcggccgacccggacaccctcgacctgacccgcgcgccctcgttcgac
ccggcgctgttcccgaacggggtgaacgtcgagttcctgaccccgctggacggtcccgcc
gacggcggccggatccggatgcgggtgtacgagcgcggcgtgggggagacccgttcctgc
ggcaccgggaccgtcgccgccgccgtcgccgcgctgcggcacgccgggcactccgccggc
gacgtgcaggtcaccgtcccgggcgggctgctgcgggtgacggtggaggcgggtaccgac
gaccggaccgggcccacgacgctgcacggcccggccgtgctgctcgcgtccggggagctg
gaccgggcgtggtgggacgcgcccgcctga

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