Pseudonocardia alni: PaSha_19355
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Entry
PaSha_19355 CDS
T11230
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
palq Pseudonocardia alni
Brite
KEGG Orthology (KO) [BR:
palq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palq03021
]
PaSha_19355
Transcription machinery [BR:
palq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PaSha_19355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
DUF7343
HTH_Crp_2
MarR_2
HTH_24
HTH_3
KORA
GerE
MarR
HTH_Tnp_4
HTH_10
Motif
Other DBs
NCBI-ProteinID:
WFG45247
LinkDB
All DBs
Position
complement(3928831..3929646)
Genome browser
AA seq
271 aa
AA seq
DB search
MRSPTLPTRPATTSRDGRRGYDDLIPDLDHLAGTPPGTPGRDALREYVIREFRPLVRNLS
RRFAAPGRGVEDIEQAGMLGLVKAVDRYDPSSATGGPLGYLVPSIRGEMKRHLRDYSWAV
RVPRDLKELAVTVGRVADEMGQRLGRPPRPSEIAAEVGVPVGEVVDALGALESHHAKSLD
APVGDDGSGEGLSLAERMGSDDPALDLAAHGPGMRAALNELPERERRMLVLRFYGDRTQS
QIATELGISQMHVSRLLSRTLARLRERLADD
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagtcccactctgcccacccggcccgcgacgacctcccgcgacggccgacggggc
tacgacgacctgatccccgatctcgaccatctggccgggaccccgccgggcacgccgggc
cgcgatgcattgcgcgagtacgtgatccgcgagttccgtccactcgtgcgcaacctgtcc
cgccgcttcgccgcccccggccggggcgtcgaggacatcgagcaggccggcatgctcggc
ctggtcaaggcggtcgaccgctacgatccgtcgtcggcgaccggcggcccgctcggctac
ctggtcccgagcatccgcggcgagatgaagcgccacctgcgggactactcctgggcggtg
cgggtcccgcgtgacctgaaggagctcgccgtcaccgtcggccgggtcgccgacgagatg
gggcagcggctcggtcgcccgccccgcccgtcggagatcgcggccgaggtcggcgtgccg
gtcggcgaggtcgtcgatgcgctcggcgcgctggagtcgcaccacgccaagtccctggac
gcgccggtcggcgacgacggttccggtgagggcctgtcgctcgccgagcggatgggctcc
gacgacccggccctggacctcgcggcgcacggccccgggatgcgtgcggcgctcaacgag
ctgcccgaacgggagcgtcgaatgctggtcctgcgcttctacggcgaccggacccagtcc
cagatcgccaccgagctgggcatctcgcagatgcacgtctcgcggctgctgtcacggacc
ctggcgcggctgcgcgagcggctggccgacgactga
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